TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000647_2.0 # Protein # Methionine-R-sufoxide reductase 3
(MSRB3) # Zebrafish

Length=186
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171052.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  77.8    1e-15
ML171013.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  58.9    4e-09
ML171007.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  40.4    0.006
ML171065.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  40.0    0.008


>ML171052.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold49, whole genome shotgun sequence
Length=3141143

 Score = 77.8 bits (190),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +1

Query  130      QCGAHLGHLFDDGPRPTKKRYCINSASLSFQPKNSATEEVEASGAAGQSSTSKNE  184
                QCGAHLGHLFDDGPRPT +RYCINSASL+FQPK+ A    E   A+G +S  K E
Sbjct  1213795  QCGAHLGHLFDDGPRPTGRRYCINSASLAFQPKDGA----EGGDASGPASDGKTE  1213947


 Score = 71.2 bits (173),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 30/38 (79%), Positives = 36/38 (95%), Gaps = 0/38 (0%)
 Frame = +2

Query  24       PSGTCRSKKTWPKTFPEEELRKRLTPMQYHVTQQKGTE  61
                PSG CR+KKTWP +FP+EEL+KRLTPMQYHVTQ++GTE
Sbjct  1209116  PSGACRTKKTWPVSFPQEELKKRLTPMQYHVTQERGTE  1209229


 Score = 59.7 bits (143),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 25/41 (61%), Positives = 33/41 (80%), Gaps = 2/41 (5%)
 Frame = +3

Query  97       SGWPSFFDLINKDAIAQTDDFSYGMHRVETTCSQCGAHLGH  137
                SGWPSFFDL+ ++++  +DDFS+G+HRVETTCSQ   H  H
Sbjct  1211262  SGWPSFFDLVKEESVTVSDDFSHGIHRVETTCSQ--VHYKH  1211378


 Score = 44.7 bits (104),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 23/26 (88%), Gaps = 0/26 (0%)
 Frame = +2

Query  1        MSGFNLLHLVSQGQPVKLKACGLPSG  26
                MSGFNLLHL+++ QPV L++C LPSG
Sbjct  1206137  MSGFNLLHLITKSQPVALRSCSLPSG  1206214


>ML171013.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold10, whole genome shotgun sequence
Length=10986315

 Score = 58.9 bits (141),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 22/41 (54%), Positives = 33/41 (80%), Gaps = 0/41 (0%)
 Frame = -3

Query  130      QCGAHLGHLFDDGPRPTKKRYCINSASLSFQPKNSATEEVE  170
                QC +HLGH+FDDGP PT +R+CINS SL+F+P+ +   +++
Sbjct  1967275  QCDSHLGHVFDDGPDPTGQRFCINSVSLTFKPRENNKPDMD  1967153


>ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold4, whole genome shotgun sequence
Length=16548284

 Score = 40.4 bits (93),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
 Frame = +2

Query  75        GTYHCVVCGAPLFMSEKKFDSGSGWPSFFDLINKDAIAQ  113
                 G Y C  C  PLF S  KF   S WP+F D + +D++ +
Sbjct  12204053  GMYVCSQCNHPLFSSRSKFAHSSPWPAFTDTVREDSVTK  12204169


>ML171065.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold62, whole genome shotgun sequence
Length=2282809

 Score = 40.0 bits (92),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 22/71 (31%), Positives = 39/71 (55%), Gaps = 3/71 (4%)
 Frame = -3

Query  55      TQQKGTESAFTGKYVDNKEEGTYHCVVCGAPLFMSEKKFDSGSGWPSFFDLINKDAIAQT  114
               + +   ES F G +      G Y C  CG  LF S  KF+  S WP+F + I++D +++ 
Sbjct  731003  SHRSENESPFIGTFFFLS--GIYVCSECGHELFSSMSKFEHSSPWPAFSETIHEDGVSKH  730830

Query  115     DDFSYGMHRVE  125
                + ++G+ +V+
Sbjct  730829  PE-AWGLLKVD  730800



Lambda      K        H        a         alpha
   0.314    0.130    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 14821624788


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40