TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000622_2.0 # Protein # Glutathione peroxidase 4b (GPx4b) # Zebrafish Length=130 Score E Sequences producing significant alignments: (Bits) Value ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 95.5 4e-39 SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig494... 89.4 2e-20 SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig489... 89.4 2e-20 ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 72.0 2e-14 ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 65.9 3e-12 ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 58.2 1e-09 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 49.7 1e-06 SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig571... 45.8 3e-05 >ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold15, whole genome shotgun sequence Length=9088374 Score = 95.5 bits (236), Expect(2) = 4e-39, Method: Compositional matrix adjust. Identities = 43/51 (84%), Positives = 47/51 (92%), Gaps = 0/51 (0%) Frame = +1 Query 50 QEPGSEAEIKEFAKGYNAEFDLFSKIDVNGDAAHPLWKWMKEQPKGRGTLG 100 +EPG++AEIKEFAKGYNAEFDLF KIDVNGD AHPLWKWMK QPKG+G LG Sbjct 6110293 KEPGTDAEIKEFAKGYNAEFDLFHKIDVNGDTAHPLWKWMKAQPKGKGLLG 6110445 Score = 85.9 bits (211), Expect(2) = 4e-39, Method: Composition-based stats. Identities = 39/49 (80%), Positives = 42/49 (86%), Gaps = 0/49 (0%) Frame = +3 Query 2 RGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 RG VCII NVASK GKT VNYTQLA MH +YAE+GLRI+GFPCNQFG Q Sbjct 6110058 RGNVCIIVNVASK*GKTKVNYTQLAGMHASYAEQGLRIMGFPCNQFGGQ 6110204 Score = 44.7 bits (104), Expect(2) = 3e-05, Method: Composition-based stats. Identities = 19/22 (86%), Positives = 21/22 (95%), Gaps = 0/22 (0%) Frame = +3 Query 109 KFLIDREGQVVKRYGPMDDPSV 130 +FLI+REGQVVKRYGP DDPSV Sbjct 6112029 QFLINREGQVVKRYGPTDDPSV 6112094 Score = 21.6 bits (44), Expect(2) = 3e-05, Method: Composition-based stats. Identities = 8/13 (62%), Positives = 11/13 (85%), Gaps = 0/13 (0%) Frame = +2 Query 99 LGNNIKWNFTKFL 111 L ++IKWNFTK + Sbjct 6111869 LYSSIKWNFTKVI 6111907 >SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig4949_0, whole genome shotgun sequence Length=3888 Score = 89.4 bits (220), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 50/65 (77%), Gaps = 0/65 (0%) Frame = -1 Query 39 ILGFPCNQFGKQEPGSEAEIKEFAKGYNAEFDLFSKIDVNGDAAHPLWKWMKEQPKGRGT 98 +L F F +EPG+E EIK+FA+ YNA+FD+FSKIDVNG AHPLWKW+KEQP G+G Sbjct 375 VLLFLSTCFILKEPGNETEIKQFAQSYNAQFDMFSKIDVNGATAHPLWKWLKEQPNGKGF 196 Query 99 LGNNI 103 +G + Sbjct 195 MGKYV 181 Score = 88.6 bits (218), Expect = 3e-20, Method: Composition-based stats. Identities = 41/50 (82%), Positives = 43/50 (86%), Gaps = 0/50 (0%) Frame = -3 Query 1 FRGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 FR V IITNVASK GKTPVNY+Q AAMH TYAE+GLRILGFPCNQFG Q Sbjct 1510 FRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1361 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 17/21 (81%), Positives = 21/21 (100%), Gaps = 0/21 (0%) Frame = -2 Query 110 FLIDREGQVVKRYGPMDDPSV 130 FLI+REGQVV+RYGP+D+PSV Sbjct 3542 FLINREGQVVRRYGPLDNPSV 3480 >SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig4898_0, whole genome shotgun sequence Length=3928 Score = 89.4 bits (220), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 50/65 (77%), Gaps = 0/65 (0%) Frame = -1 Query 39 ILGFPCNQFGKQEPGSEAEIKEFAKGYNAEFDLFSKIDVNGDAAHPLWKWMKEQPKGRGT 98 +L F F +EPG+E EIK+FA+ YNA+FD+FSKIDVNG AHPLWKW+KEQP G+G Sbjct 439 VLLFLSTCFILKEPGNETEIKQFAQSYNAQFDMFSKIDVNGATAHPLWKWLKEQPNGKGF 260 Query 99 LGNNI 103 +G + Sbjct 259 MGKYV 245 Score = 88.6 bits (218), Expect = 3e-20, Method: Composition-based stats. Identities = 41/50 (82%), Positives = 43/50 (86%), Gaps = 0/50 (0%) Frame = -3 Query 1 FRGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 FR V IITNVASK GKTPVNY+Q AAMH TYAE+GLRILGFPCNQFG Q Sbjct 1574 FRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1425 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 17/21 (81%), Positives = 21/21 (100%), Gaps = 0/21 (0%) Frame = -2 Query 110 FLIDREGQVVKRYGPMDDPSV 130 FLI+REGQVV+RYGP+D+PSV Sbjct 3615 FLINREGQVVRRYGPLDNPSV 3553 >ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold102, whole genome shotgun sequence Length=1085974 Score = 72.0 bits (175), Expect = 2e-14, Method: Composition-based stats. Identities = 36/86 (42%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +1 Query 5 VCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQEPGSEAEIKEFAKG 64 V ++ NVAS+ G T +Y L + + +L FPCNQFG+QEPGS+ EI F + Sbjct 215359 VSLVVNVASECGFTEEHYEDLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 215538 Query 65 -YNAEFDLFSKIDVNGDAAHPLWKWM 89 Y F LFSKI V G A+ ++K++ Sbjct 215539 VYGVSFPLFSKIAVVGTGANNVYKYL 215616 Score = 71.6 bits (174), Expect = 3e-14, Method: Composition-based stats. Identities = 36/86 (42%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query 5 VCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQEPGSEAEIKEF-AK 63 V ++ NVAS+ G T +Y L + + +L FPCNQFG+QEPGS+ EI F + Sbjct 223337 VSLVVNVASECGFTEEHYENLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVGR 223516 Query 64 GYNAEFDLFSKIDVNGDAAHPLWKWM 89 Y F LFSKI V G A+ ++K++ Sbjct 223517 VYGVSFPLFSKIAVVGTGANNVYKYL 223594 >ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold17, whole genome shotgun sequence Length=8097053 Score = 65.9 bits (159), Expect = 3e-12, Method: Composition-based stats. Identities = 31/84 (37%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = -2 Query 7 IITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQEPGSEAEIKEFAKG-Y 65 ++ NVAS +T NY L +H +L FPC QFG E G+ +I+ FAK Y Sbjct 442972 LVVNVASHCEQTEANYVSLQELHRELGTSHFNVLAFPCGQFGDTETGTSRDIEAFAKSTY 442793 Query 66 NAEFDLFSKIDVNGDAAHPLWKWM 89 F FS+I + G A P +K++ Sbjct 442792 GVTFPFFSRIKIMGSEADPAFKFL 442721 >ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold1, whole genome shotgun sequence Length=19776732 Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Frame = -1 Query 1 FRGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 +G V +I NVAS G T +YTQ+ +H Y+ KGL ILG PCNQFG Q Sbjct 4846980 LKGKVVLIENVASL*GTTTRDYTQMNELHRRYSTKGLVILGVPCNQFGHQ 4846831 Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats. Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Frame = +2 Query 1 FRGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 +G V +I NVAS G T +YTQ+ +H YA KGL ILG PCNQFG Q Sbjct 7018739 LQGKVVLIENVASL*GTTTRDYTQMNELHDRYAGKGLVILGVPCNQFGHQ 7018888 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (51%), Gaps = 17/77 (22%) Frame = -3 Query 64 GYNAEFDLFSKIDVNGDAAHPLWKWMKEQ--------------PK---GRGTLGNNIKWN 106 + +F L K++VNG+ AHPL+ ++KE+ PK N++ WN Sbjct 4845664 AFEPKFKLLEKVNVNGEDAHPLFVYLKEKLPFPCDDAMALMTDPKFIIWSPVCRNDVSWN 4845485 Query 107 FTKFLIDREGQVVKRYG 123 F KFL+ +G+ KRY Sbjct 4845484 FEKFLVGPDGEPYKRYS 4845434 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = +2 Query 1 FRGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 50 FRG V +I NVAS G T ++++L + Y + L +LGFPCNQFG Q Sbjct 2574329 FRGRVVLIENVASL*GTTARDFSELNQLQSKYPHR-LVVLGFPCNQFGYQ 2574475 Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 17/77 (22%) Frame = +1 Query 64 GYNAEFDLFSKIDVNGDAAHPLWKWMKEQ---PKGRGT--------------LGNNIKWN 106 G+ F +F K DVNG + HP++ ++K++ P T ++ WN Sbjct 2574997 GFQPSFTIFEKCDVNGTSTHPVFAYLKDKLPYPDDDPTSFMQDPKFLVWSPISRTDVSWN 2575176 Query 107 FTKFLIDREGQVVKRYG 123 F KF+I EG+ KRY Sbjct 2575177 FEKFVIGPEGEPFKRYS 2575227 >SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig5710_0, whole genome shotgun sequence Length=3320 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 23/36 (64%), Gaps = 0/36 (0%) Frame = -1 Query 23 TQLAAMHVTYAEKGLRILGFPCNQFGKQEPGSEAEI 58 + L A+H GL ILGFP NQFGKQEPG EI Sbjct 2879 SDLNALHEKLKPHGLTILGFPSNQFGKQEPGQRHEI 2772 Lambda K H a alpha 0.319 0.138 0.434 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 5078062100 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40