TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000618_2.0 # Protein # Glutathione peroxidase 4a (GPx4a) # Zebrafish Length=113 Score E Sequences producing significant alignments: (Bits) Value ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 89.4 1e-33 SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig494... 97.1 2e-23 SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig489... 97.1 2e-23 ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 68.9 1e-13 ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 66.6 1e-12 ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 61.2 6e-11 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 52.8 6e-08 SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig571... 43.1 2e-04 >ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold15, whole genome shotgun sequence Length=9088374 Score = 89.4 bits (220), Expect(2) = 1e-33, Method: Compositional matrix adjust. Identities = 39/51 (76%), Positives = 45/51 (88%), Gaps = 0/51 (0%) Frame = +1 Query 53 QEPGTNSQIKEFAKSYNAEFDMFSKIDVNGDGAHPLWKWLKDQPNGKGFLG 103 +EPGT+++IKEFAK YNAEFD+F KIDVNGD AHPLWKW+K QP GKG LG Sbjct 6110293 KEPGTDAEIKEFAKGYNAEFDLFHKIDVNGDTAHPLWKWMKAQPKGKGLLG 6110445 Score = 73.6 bits (179), Expect(2) = 1e-33, Method: Compositional matrix adjust. Identities = 34/49 (69%), Positives = 38/49 (78%), Gaps = 0/49 (0%) Frame = +3 Query 5 RGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 RG V II NVASK GKT VNY+Q A MHA Y+E+GLRI+ FP NQFG Q Sbjct 6110058 RGNVCIIVNVASK*GKTKVNYTQLAGMHASYAEQGLRIMGFPCNQFGGQ 6110204 >SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig4949_0, whole genome shotgun sequence Length=3888 Score = 97.1 bits (240), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 43/62 (69%), Positives = 52/62 (84%), Gaps = 0/62 (0%) Frame = -1 Query 42 ILAFPSNQFGRQEPGTNSQIKEFAKSYNAEFDMFSKIDVNGDGAHPLWKWLKDQPNGKGF 101 +L F S F +EPG ++IK+FA+SYNA+FDMFSKIDVNG AHPLWKWLK+QPNGKGF Sbjct 375 VLLFLSTCFILKEPGNETEIKQFAQSYNAQFDMFSKIDVNGATAHPLWKWLKEQPNGKGF 196 Query 102 LG 103 +G Sbjct 195 MG 190 Score = 85.9 bits (211), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/53 (77%), Positives = 42/53 (79%), Gaps = 0/53 (0%) Frame = -3 Query 1 FTYFRGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 FR VVIITNVASK GKTPVNYSQFA MHA Y+ERGLRIL FP NQFG Q Sbjct 1519 LCIFRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1361 >SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig4898_0, whole genome shotgun sequence Length=3928 Score = 97.1 bits (240), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 43/62 (69%), Positives = 52/62 (84%), Gaps = 0/62 (0%) Frame = -1 Query 42 ILAFPSNQFGRQEPGTNSQIKEFAKSYNAEFDMFSKIDVNGDGAHPLWKWLKDQPNGKGF 101 +L F S F +EPG ++IK+FA+SYNA+FDMFSKIDVNG AHPLWKWLK+QPNGKGF Sbjct 439 VLLFLSTCFILKEPGNETEIKQFAQSYNAQFDMFSKIDVNGATAHPLWKWLKEQPNGKGF 260 Query 102 LG 103 +G Sbjct 259 MG 254 Score = 85.9 bits (211), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/53 (77%), Positives = 42/53 (79%), Gaps = 0/53 (0%) Frame = -3 Query 1 FTYFRGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 FR VVIITNVASK GKTPVNYSQFA MHA Y+ERGLRIL FP NQFG Q Sbjct 1583 LCIFRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1425 >ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold102, whole genome shotgun sequence Length=1085974 Score = 68.9 bits (167), Expect = 1e-13, Method: Composition-based stats. Identities = 34/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +1 Query 8 VVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQEPGTNSQIKEFAKS 67 V ++ NVAS+ G T +Y ++ + +LAFP NQFG+QEPG++ +I F + Sbjct 215359 VSLVVNVASECGFTEEHYEDLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 215538 Query 68 -YNAEFDMFSKIDVNGDGAHPLWKWL 92 Y F +FSKI V G GA+ ++K+L Sbjct 215539 VYGVSFPLFSKIAVVGTGANNVYKYL 215616 Score = 68.2 bits (165), Expect = 3e-13, Method: Composition-based stats. Identities = 34/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +2 Query 8 VVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQEPGTNSQIKEF-AK 66 V ++ NVAS+ G T +Y ++ + +LAFP NQFG+QEPG++ +I F + Sbjct 223337 VSLVVNVASECGFTEEHYENLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVGR 223516 Query 67 SYNAEFDMFSKIDVNGDGAHPLWKWL 92 Y F +FSKI V G GA+ ++K+L Sbjct 223517 VYGVSFPLFSKIAVVGTGANNVYKYL 223594 >ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold17, whole genome shotgun sequence Length=8097053 Score = 66.6 bits (161), Expect = 1e-12, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 46/84 (55%), Gaps = 1/84 (1%) Frame = -2 Query 10 IITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQEPGTNSQIKEFAKS-Y 68 ++ NVAS +T NY E+H + +LAFP QFG E GT+ I+ FAKS Y Sbjct 442972 LVVNVASHCEQTEANYVSLQELHRELGTSHFNVLAFPCGQFGDTETGTSRDIEAFAKSTY 442793 Query 69 NAEFDMFSKIDVNGDGAHPLWKWL 92 F FS+I + G A P +K+L Sbjct 442792 GVTFPFFSRIKIMGSEADPAFKFL 442721 >ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold1, whole genome shotgun sequence Length=19776732 Score = 61.2 bits (147), Expect = 6e-11, Method: Composition-based stats. Identities = 28/53 (53%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Frame = -1 Query 1 FTYFRGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 F+ +GKVV+I NVAS G T +Y+Q E+H +YS +GL IL P NQFG Q Sbjct 4846989 FSALKGKVVLIENVASL*GTTTRDYTQMNELHRRYSTKGLVILGVPCNQFGHQ 4846831 Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats. Identities = 27/53 (51%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Frame = +2 Query 1 FTYFRGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 F+ +GKVV+I NVAS G T +Y+Q E+H +Y+ +GL IL P NQFG Q Sbjct 7018730 FSSLQGKVVLIENVASL*GTTTRDYTQMNELHDRYAGKGLVILGVPCNQFGHQ 7018888 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (2%) Frame = +2 Query 1 FTYFRGKVVIITNVASKXGKTPVNYSQFAEMHAKYSERGLRILAFPSNQFGRQ 53 F FRG+VV+I NVAS G T ++S+ ++ +KY R L +L FP NQFG Q Sbjct 2574320 FNVFRGRVVLIENVASL*GTTARDFSELNQLQSKYPHR-LVVLGFPCNQFGYQ 2574475 >SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig5710_0, whole genome shotgun sequence Length=3320 Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 19/36 (53%), Positives = 22/36 (61%), Gaps = 0/36 (0%) Frame = -1 Query 26 SQFAEMHAKYSERGLRILAFPSNQFGRQEPGTNSQI 61 S +H K GL IL FPSNQFG+QEPG +I Sbjct 2879 SDLNALHEKLKPHGLTILGFPSNQFGKQEPGQRHEI 2772 Lambda K H a alpha 0.318 0.136 0.423 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 5082658900 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40