TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000623_2.0 # Protein # Glutathione peroxidase 3b (GPx3b) # Zebrafish Length=178 Score E Sequences producing significant alignments: (Bits) Value ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 130 3e-34 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 100 9e-24 ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 97.8 1e-22 ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 60.5 1e-09 SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig571... 59.7 1e-09 ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 51.6 1e-06 SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig494... 45.4 1e-04 SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig489... 45.4 1e-04 ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 42.4 0.001 >ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold4, whole genome shotgun sequence Length=16548284 Score = 130 bits (328), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 62/118 (53%), Positives = 77/118 (65%), Gaps = 29/118 (25%) Frame = +3 Query 76 NHETLNVLQHVRPGSGFLPKFPIFSRIEVNGSDEDPLYAYLK------------------ 117 NHETL++L++VRPG GF+PKFP+F ++EVNG +E+PL+ YLK Sbjct 6343146 NHETLSILKYVRPGGGFVPKFPVFGKVEVNGLNEEPLFTYLKVVLVFYTVYECIKLVHDF 6343325 Query 118 -----------ESLPFVNPVIGDIRKLYWSPIKANDVRWNFEKFLITADGRPYKRYYC 164 E LPFVNPVIGD++K YWSPI ND+RWNFEKFLITADG +KR C Sbjct 6343326 F*L*SIFVLSQELLPFVNPVIGDMKKFYWSPITVNDIRWNFEKFLITADGMLFKR*SC 6343499 Score = 57.4 bits (137), Expect(2) = 2e-18, Method: Compositional matrix adjust. Identities = 25/33 (76%), Positives = 28/33 (85%), Gaps = 0/33 (0%) Frame = +3 Query 42 QYHRMNALMDMYGGQRFTVLGFPCNQFGLQSPG 74 QYHR+NALM+M+G FTVL FP NQFGLQSPG Sbjct 6342195 QYHRLNALMEMFGDLNFTVLSFPSNQFGLQSPG 6342293 Score = 55.8 bits (133), Expect(2) = 2e-18, Method: Compositional matrix adjust. Identities = 28/41 (68%), Positives = 34/41 (83%), Gaps = 0/41 (0%) Frame = +1 Query 1 MAANSVYDFTVETLEEKSVSLDIFRGKVLLIMNVATFXGST 41 MA S+YDF+VETL+ + VSL +RGKVLLI+NVATF GST Sbjct 6341950 MAYKSIYDFSVETLDGQLVSLSNYRGKVLLIINVATF*GST 6342072 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 100 bits (250), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 49/97 (51%), Positives = 62/97 (64%), Gaps = 4/97 (4%) Frame = +1 Query 70 LQSPGENHETLNVLQHVRPGSGFLPKFPIFSRIEVNGSDEDPLYAYLKESLPFVN----P 125 LQ N E LN LQHVRPG GF P F IF + +VNG+ P++AYLK+ LP+ + Sbjct 2574934 LQENCSNGEILNSLQHVRPGGGFQPSFTIFEKCDVNGTSTHPVFAYLKDKLPYPDDDPTS 2575113 Query 126 VIGDIRKLYWSPIKANDVRWNFEKFLITADGRPYKRY 162 + D + L WSPI DV WNFEKF+I +G P+KRY Sbjct 2575114 FMQDPKFLVWSPISRTDVSWNFEKFVIGPEGEPFKRY 2575224 Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/71 (48%), Positives = 43/71 (61%), Gaps = 3/71 (4%) Frame = +2 Query 3 ANSVYDFTVETLEEKSVSLDIFRGKVLLIMNVATFXGST--QYHRMNALMDMYGGQRFTV 60 A + YD TLE SV ++FRG+V+LI NVA+ G+T + +N L Y R V Sbjct 2574266 AKTFYDLKATTLEGDSVDFNVFRGRVVLIENVASL*GTTARDFSELNQLQSKY-PHRLVV 2574442 Query 61 LGFPCNQFGLQ 71 LGFPCNQFG Q Sbjct 2574443 LGFPCNQFGYQ 2574475 >ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold1, whole genome shotgun sequence Length=19776732 Score = 97.8 bits (242), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 46/96 (48%), Positives = 61/96 (64%), Gaps = 4/96 (4%) Frame = -3 Query 71 QSPGENHETLNVLQHVRPGSGFLPKFPIFSRIEVNGSDEDPLYAYLKESLPF----VNPV 126 Q +N E L L+++RPG+ F PKF + ++ VNG D PL+ YLKE LPF + Sbjct 4845724 QENCKNDEILRSLKYIRPGNAFEPKFKLLEKVNVNGEDAHPLFVYLKEKLPFPCDDAMAL 4845545 Query 127 IGDIRKLYWSPIKANDVRWNFEKFLITADGRPYKRY 162 + D + + WSP+ NDV WNFEKFL+ DG PYKRY Sbjct 4845544 MTDPKFIIWSPVCRNDVSWNFEKFLVGPDGEPYKRY 4845437 Score = 91.3 bits (225), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/102 (44%), Positives = 62/102 (61%), Gaps = 4/102 (4%) Frame = +1 Query 65 CNQFGLQSPGENHETLNVLQHVRPGSGFLPKFPIFSRIEVNGSDEDPLYAYLKESLPF-- 122 C+ Q +N E L L++VRPG+GF PKF + + +VNG D L+ +L+ LPF Sbjct 7019878 CSD*PFQENCKNEEILVSLKYVRPGNGFEPKFQLLEKADVNGKDAHALFVFLRGKLPFPS 7020057 Query 123 --VNPVIGDIRKLYWSPIKANDVRWNFEKFLITADGRPYKRY 162 + +I D + + WSP+ DV WNFEKFLI DG P+KRY Sbjct 7020058 DEPSALINDPKLILWSPVSRTDVAWNFEKFLIGPDGVPFKRY 7020183 Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (3%) Frame = +2 Query 3 ANSVYDFTVETLEEKSVSLDIFRGKVLLIMNVATFXGST--QYHRMNALMDMYGGQRFTV 60 A YD + + L ++ + +GKV+LI NVA+ G+T Y +MN L D Y G+ + Sbjct 7018676 AAKFYDLSSKLLTGETFNFSSLQGKVVLIENVASL*GTTTRDYTQMNELHDRYAGKGLVI 7018855 Query 61 LGFPCNQFGLQ 71 LG PCNQFG Q Sbjct 7018856 LGVPCNQFGHQ 7018888 Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 41/75 (55%), Gaps = 4/75 (5%) Frame = -1 Query 1 MAAN--SVYDFTVETLEEKSVSLDIFRGKVLLIMNVATFXGST--QYHRMNALMDMYGGQ 56 MA N YD T + L + S +GKV+LI NVA+ G+T Y +MN L Y + Sbjct 4847055 MAGNVRRFYDLTAKLLFGECFSFSALKGKVVLIENVASL*GTTTRDYTQMNELHRRYSTK 4846876 Query 57 RFTVLGFPCNQFGLQ 71 +LG PCNQFG Q Sbjct 4846875 GLVILGVPCNQFGHQ 4846831 >ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold102, whole genome shotgun sequence Length=1085974 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/91 (40%), Positives = 51/91 (56%), Gaps = 7/91 (8%) Frame = +1 Query 28 VLLIMNVATFXGSTQ--YHRMNALMDMYGGQRFTVLGFPCNQFGLQSPGENHETLNVLQH 85 V L++NVA+ G T+ Y + L +G F VL FPCNQFG Q PG + E + ++ Sbjct 215359 VSLVVNVASECGFTEEHYEDLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 215538 Query 86 VRPGSGFLPKFPIFSRIEVNGSDEDPLYAYL 116 V S FP+FS+I V G+ + +Y YL Sbjct 215539 VYGVS-----FPLFSKIAVVGTGANNVYKYL 215616 Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/91 (40%), Positives = 50/91 (55%), Gaps = 7/91 (8%) Frame = +2 Query 28 VLLIMNVATFXGSTQ--YHRMNALMDMYGGQRFTVLGFPCNQFGLQSPGENHETLNVLQH 85 V L++NVA+ G T+ Y + L +G F VL FPCNQFG Q PG + E + + Sbjct 223337 VSLVVNVASECGFTEEHYENLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVGR 223516 Query 86 VRPGSGFLPKFPIFSRIEVNGSDEDPLYAYL 116 V S FP+FS+I V G+ + +Y YL Sbjct 223517 VYGVS-----FPLFSKIAVVGTGANNVYKYL 223594 >SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig5710_0, whole genome shotgun sequence Length=3320 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 44/66 (67%), Gaps = 7/66 (11%) Frame = -3 Query 112 LYAYLKESLPFVNPVIGDIRKLYWSPIKANDVRWNFEKFLITADGRPYKRYY-------C 164 + + ++ S P V+ ++GD +++W+P+K +D++WNFEKFL+ DG+P R++ Sbjct 1893 VLSVVQSSCPPVSDLLGDPARMFWTPVKLSDIKWNFEKFLVGPDGKPVMRWHPSVPVSKV 1714 Query 165 ETDMQH 170 E D++H Sbjct 1713 EADIRH 1696 Score = 41.6 bits (96), Expect(2) = 9e-07, Method: Compositional matrix adjust. Identities = 19/39 (49%), Positives = 24/39 (62%), Gaps = 0/39 (0%) Frame = -1 Query 46 MNALMDMYGGQRFTVLGFPCNQFGLQSPGENHETLNVLQ 84 +NAL + T+LGFP NQFG Q PG+ HE L L+ Sbjct 2873 LNALHEKLKPHGLTILGFPSNQFGKQEPGQRHEILPGLK 2757 Score = 32.0 bits (71), Expect(2) = 9e-07, Method: Composition-based stats. Identities = 15/37 (41%), Positives = 27/37 (73%), Gaps = 1/37 (3%) Frame = -2 Query 4 NSVYDFTVETL-EEKSVSLDIFRGKVLLIMNVATFXG 39 +++Y + +TL E ++V+L F+GK +L +NVAT+ G Sbjct 3103 DTIYKYQAKTLNESRTVNLSDFKGKSVLFINVATY*G 2993 Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 25/34 (74%), Gaps = 0/34 (0%) Frame = -2 Query 84 QHVRPGSGFLPKFPIFSRIEVNGSDEDPLYAYLK 117 +HVRPG+ F+P F +F + +VNG DE ++ +LK Sbjct 2269 RHVRPGNEFVPNFLLFEKGDVNGKDEQGVFTFLK 2168 >ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold17, whole genome shotgun sequence Length=8097053 Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/89 (34%), Positives = 43/89 (48%), Gaps = 7/89 (8%) Frame = -2 Query 30 LIMNVATFXGSTQ--YHRMNALMDMYGGQRFTVLGFPCNQFGLQSPGENHETLNVLQHVR 87 L++NVA+ T+ Y + L G F VL FPC QFG G + + Sbjct 442972 LVVNVASHCEQTEANYVSLQELHRELGTSHFNVLAFPCGQFGDTETGTSRDI-----EAF 442808 Query 88 PGSGFLPKFPIFSRIEVNGSDEDPLYAYL 116 S + FP FSRI++ GS+ DP + +L Sbjct 442807 AKSTYGVTFPFFSRIKIMGSEADPAFKFL 442721 >SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig4949_0, whole genome shotgun sequence Length=3888 Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (4%) Frame = -3 Query 19 VSLDIFRGKVLLIMNVATFXGST--QYHRMNALMDMYGGQRFTVLGFPCNQFGLQ 71 V L IFR V++I NVA+ G T Y + A+ Y + +LGFPCNQFG Q Sbjct 1525 VCLCIFRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1361 >SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig4898_0, whole genome shotgun sequence Length=3928 Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (4%) Frame = -3 Query 19 VSLDIFRGKVLLIMNVATFXGST--QYHRMNALMDMYGGQRFTVLGFPCNQFGLQ 71 V L IFR V++I NVA+ G T Y + A+ Y + +LGFPCNQFG Q Sbjct 1589 VCLCIFRRDVVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQ 1425 >ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold15, whole genome shotgun sequence Length=9088374 Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/49 (43%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +3 Query 25 RGKVLLIMNVATFXGSTQ--YHRMNALMDMYGGQRFTVLGFPCNQFGLQ 71 RG V +I+NVA+ G T+ Y ++ + Y Q ++GFPCNQFG Q Sbjct 6110058 RGNVCIIVNVASK*GKTKVNYTQLAGMHASYAEQGLRIMGFPCNQFGGQ 6110204 Lambda K H a alpha 0.322 0.140 0.429 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 13197337140 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40