TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000624_2.0 # Protein # Glutathione peroxidase 1b (GPx1b) # Zebrafish Length=191 Score E Sequences producing significant alignments: (Bits) Value ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 206 2e-60 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 174 4e-49 ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 84.0 1e-17 SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig571... 63.5 1e-10 ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 59.7 3e-09 SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig494... 56.6 2e-08 SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig489... 56.6 2e-08 ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 45.4 2e-04 ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 45.1 2e-04 >ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold1, whole genome shotgun sequence Length=19776732 Score = 206 bits (525), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 93/117 (79%), Positives = 108/117 (92%), Gaps = 0/117 (0%) Frame = -3 Query 75 QENCKNEEILQSLKYVRPGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLPQPSDDPVSL 134 QENCKN+EIL+SLKY+RPGN FEPKF++LEK+ VNGE+AHPLF +LKEKLP P DD ++L Sbjct 4845724 QENCKNDEILRSLKYIRPGNAFEPKFKLLEKVNVNGEDAHPLFVYLKEKLPFPCDDAMAL 4845545 Query 135 MGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKRYSRRFLTIDIDADIKELLKRTK 191 M DPKFIIWSPVCRND+SWNFEKFL+GPDGEP+KRYSR FL+IDI+ADIKELLKR K Sbjct 4845544 MTDPKFIIWSPVCRNDVSWNFEKFLVGPDGEPYKRYSRNFLSIDIEADIKELLKRVK 4845374 Score = 185 bits (470), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%) Frame = +1 Query 69 CNQFGHQENCKNEEILQSLKYVRPGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLPQPS 128 C+ QENCKNEEIL SLKYVRPGNGFEPKFQ+LEK +VNG++AH LF FL+ KLP PS Sbjct 7019878 CSD*PFQENCKNEEILVSLKYVRPGNGFEPKFQLLEKADVNGKDAHALFVFLRGKLPFPS 7020057 Query 129 DDPVSLMGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKRYSRRFLTIDIDADIKELLK 188 D+P +L+ DPK I+WSPV R D++WNFEKFLIGPDG PFKRYSR+FLT DI+ DIK+LL Sbjct 7020058 DEPSALINDPKLILWSPVSRTDVAWNFEKFLIGPDGVPFKRYSRKFLTSDIEGDIKKLLS 7020237 Query 189 RT 190 + Sbjct 7020238 QA 7020243 Score = 124 bits (311), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 58/75 (77%), Positives = 64/75 (85%), Gaps = 0/75 (0%) Frame = +2 Query 1 MAGTMKKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLXGTTVRDYTQMNELHSRYADQ 60 MA KFYDLS+KLL+G+ NFSSL+GKVVLIENVASL GTT RDYTQMNELH RYA + Sbjct 7018664 MAKMAAKFYDLSSKLLTGETFNFSSLQGKVVLIENVASL*GTTTRDYTQMNELHDRYAGK 7018843 Query 61 GLVVLGAPCNQFGHQ 75 GLV+LG PCNQFGHQ Sbjct 7018844 GLVILGVPCNQFGHQ 7018888 Score = 122 bits (306), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 56/75 (75%), Positives = 66/75 (88%), Gaps = 0/75 (0%) Frame = -1 Query 1 MAGTMKKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLXGTTVRDYTQMNELHSRYADQ 60 MAG +++FYDL+AKLL G+ +FS+LKGKVVLIENVASL GTT RDYTQMNELH RY+ + Sbjct 4847055 MAGNVRRFYDLTAKLLFGECFSFSALKGKVVLIENVASL*GTTTRDYTQMNELHRRYSTK 4846876 Query 61 GLVVLGAPCNQFGHQ 75 GLV+LG PCNQFGHQ Sbjct 4846875 GLVILGVPCNQFGHQ 4846831 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 174 bits (440), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 76/117 (65%), Positives = 95/117 (81%), Gaps = 0/117 (0%) Frame = +1 Query 75 QENCKNEEILQSLKYVRPGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLPQPSDDPVSL 134 QENC N EIL SL++VRPG GF+P F I EK +VNG + HP+FA+LK+KLP P DDP S Sbjct 2574937 QENCSNGEILNSLQHVRPGGGFQPSFTIFEKCDVNGTSTHPVFAYLKDKLPYPDDDPTSF 2575116 Query 135 MGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKRYSRRFLTIDIDADIKELLKRTK 191 M DPKF++WSP+ R D+SWNFEKF+IGP+GEPFKRYS++F TI I+ DI+ LL+ TK Sbjct 2575117 MQDPKFLVWSPISRTDVSWNFEKFVIGPEGEPFKRYSKKFPTIAIEPDIQRLLRLTK 2575287 Score = 89.0 bits (219), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/75 (57%), Positives = 56/75 (75%), Gaps = 1/75 (1%) Frame = +2 Query 1 MAGTMKKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLXGTTVRDYTQMNELHSRYADQ 60 M K FYDL A L GD ++F+ +G+VVLIENVASL GTT RD++++N+L S+Y + Sbjct 2574254 MTFIAKTFYDLKATTLEGDSVDFNVFRGRVVLIENVASL*GTTARDFSELNQLQSKYPHR 2574433 Query 61 GLVVLGAPCNQFGHQ 75 LVVLG PCNQFG+Q Sbjct 2574434 -LVVLGFPCNQFGYQ 2574475 >ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold4, whole genome shotgun sequence Length=16548284 Score = 84.0 bits (206), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/117 (44%), Positives = 58/117 (50%), Gaps = 29/117 (25%) Frame = +3 Query 80 NEEILQSLKYVRPGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLP-------------- 125 N E L LKYVRPG GF PKF + K+EVNG N PLF +LK L Sbjct 6343146 NHETLSILKYVRPGGGFVPKFPVFGKVEVNGLNEEPLFTYLKVVLVFYTVYECIKLVHDF 6343325 Query 126 -------------QPSDDPVSLMGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKR 169 P +PV +GD K WSP+ NDI WNFEKFLI DG FKR Sbjct 6343326 F*L*SIFVLSQELLPFVNPV--IGDMKKFYWSPITVNDIRWNFEKFLITADGMLFKR 6343490 >SAUM01028039.1 Anarrhichthys ocellatus isolate YVR2014 contig5710_0, whole genome shotgun sequence Length=3320 Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (2%) Frame = -3 Query 126 QPSDDPVS-LMGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKRYSRRFLTIDIDADIK 184 Q S PVS L+GDP + W+PV +DI WNFEKFL+GPDG+P R+ ++ADI+ Sbjct 1878 QSSCPPVSDLLGDPARMFWTPVKLSDIKWNFEKFLVGPDGKPVMRWHPSVPVSKVEADIR 1699 Query 185 ELL 187 L Sbjct 1698 HYL 1690 Score = 41.2 bits (95), Expect(2) = 4e-04, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 24/41 (59%), Gaps = 0/41 (0%) Frame = -1 Query 48 TQMNELHSRYADQGLVVLGAPCNQFGHQENCKNEEILQSLK 88 + +N LH + GL +LG P NQFG QE + EIL LK Sbjct 2879 SDLNALHEKLKPHGLTILGFPSNQFGKQEPGQRHEILPGLK 2757 Score = 23.5 bits (49), Expect(2) = 4e-04, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 18/34 (53%), Gaps = 1/34 (3%) Frame = -2 Query 9 YDLSAKLLS-GDLLNFSSLKGKVVLIENVASLXG 41 Y AK L+ +N S KGK VL NVA+ G Sbjct 3094 YKYQAKTLNESRTVNLSDFKGKSVLFINVATY*G 2993 >ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold15, whole genome shotgun sequence Length=9088374 Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 0/64 (0%) Frame = +3 Query 12 SAKLLSGDLLNFSSLKGKVVLIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQ 71 S +L S L F +G V +I NVAS G T +YTQ+ +H+ YA+QGL ++G PCNQ Sbjct 6110013 SPELFSQFNLLFFPTRGNVCIIVNVASK*GKTKVNYTQLAGMHASYAEQGLRIMGFPCNQ 6110192 Query 72 FGHQ 75 FG Q Sbjct 6110193 FGGQ 6110204 >SAUM01027096.1 Anarrhichthys ocellatus isolate YVR2014 contig4949_0, whole genome shotgun sequence Length=3888 Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 35/48 (73%), Gaps = 0/48 (0%) Frame = -3 Query 30 VVLIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQFGHQEN 77 VV+I NVAS G T +Y+Q +H+ YA++GL +LG PCNQFG+Q N Sbjct 1498 VVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQVN 1355 >SAUM01027034.1 Anarrhichthys ocellatus isolate YVR2014 contig4898_0, whole genome shotgun sequence Length=3928 Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 35/48 (73%), Gaps = 0/48 (0%) Frame = -3 Query 30 VVLIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQFGHQEN 77 VV+I NVAS G T +Y+Q +H+ YA++GL +LG PCNQFG+Q N Sbjct 1562 VVIITNVASK*GKTPVNYSQFAAMHATYAERGLRILGFPCNQFGNQVN 1419 >ML171105.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold102, whole genome shotgun sequence Length=1085974 Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/91 (32%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Frame = +1 Query 30 VVLIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQFGHQENCKNEEILQSLKY 89 V L+ NVAS G T Y + +L + VL PCNQFG QE ++EI ++ Sbjct 215359 VSLVVNVASECGFTEEHYEDLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 215538 Query 90 VRPGNGFEPKFQILEKLEVNGENAHPLFAFL 120 V + F + K+ V G A+ ++ +L Sbjct 215539 V-----YGVSFPLFSKIAVVGTGANNVYKYL 215616 Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/91 (32%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Frame = +2 Query 30 VVLIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQFGHQENCKNEEILQSLKY 89 V L+ NVAS G T Y + +L + VL PCNQFG QE ++EI + Sbjct 223337 VSLVVNVASECGFTEEHYENLQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFV-- 223510 Query 90 VRPGNGFEPKFQILEKLEVNGENAHPLFAFL 120 G + F + K+ V G A+ ++ +L Sbjct 223511 ---GRVYGVSFPLFSKIAVVGTGANNVYKYL 223594 >ML171020.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold17, whole genome shotgun sequence Length=8097053 Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/104 (27%), Positives = 44/104 (42%), Gaps = 5/104 (5%) Frame = -2 Query 32 LIENVASLXGTTVRDYTQMNELHSRYADQGLVVLGAPCNQFGHQENCKNEEILQSLKYVR 91 L+ NVAS T +Y + ELH VL PC QFG E + +I K Sbjct 442972 LVVNVASHCEQTEANYVSLQELHRELGTSHFNVLAFPCGQFGDTETGTSRDIEAFAK--- 442802 Query 92 PGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLPQPSDDPVSLM 135 + + F ++++ G A P F FL + D ++++ Sbjct 442801 --STYGVTFPFFSRIKIMGSEADPAFKFLTGWYLTTNRDTITVI 442676 Lambda K H a alpha 0.319 0.139 0.416 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 15632935780 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40