TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000613_2.0 # Protein # Iodothyronine deiodinase 3b (DIO3b) # Zebrafish Length=254 Score E Sequences producing significant alignments: (Bits) Value ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 339 8e-106 ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 320 4e-99 ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 135 2e-34 ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 65.1 1e-10 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 339 bits (870), Expect = 8e-106, Method: Compositional matrix adjust. Identities = 156/253 (62%), Positives = 208/253 (82%), Gaps = 6/253 (2%) Frame = +3 Query 1 RALKNALVCLLILPRFLVAAFMLWCLDFLCVRKRVLVHLQeraeeeeedaeeeeePLCIS 60 +A+KNA+VCL++LPRFL+AA + W LDFLC+R+RV ++++ + + PLCIS Sbjct 6024708 KAIKNAIVCLVLLPRFLMAALIFWLLDFLCIRRRVFFRMKQQEGDAIDP------PLCIS 6024869 Query 61 DSSRMFSWESLKAVFHGHKLDYMKSARLGHAAPDSEVFPLAEPRRGRVLEFARGHRPLVL 120 DS+R+FS ESLKAV+HGHKLD++K+A LGH AP++EV L + RR R+L++A+ RPL+L Sbjct 6024870 DSNRLFSLESLKAVWHGHKLDFLKAAHLGHGAPNTEVVQLEDQRRSRILDYAKEKRPLIL 6025049 Query 121 SFGSCSXPPFMRRLKAFRRLVLRYADVADALLIYIEEAHPSDGWRSSDAPHQIRRHRSLE 180 +FGSC+ PPFM RLKAFR +V + AD+AD++++YIEEAHPSDGW S+DAP+QI HR LE Sbjct 6025050 NFGSCT*PPFMVRLKAFRGVVQQNADIADSVVVYIEEAHPSDGWMSTDAPYQIPTHRCLE 6025229 Query 181 ERLSAARLMEREAPGCAVVADGMENAANSAYGAYFDRLYIVQDGRVVYQGGRGPEGFRIS 240 +RL+AA+LM E PGC VV D MEN++N+AYGAYFDRLYI+Q+G +VYQGGRGPEG+RI+ Sbjct 6025230 DRLNAAQLMHLEVPGCPVVVDSMENSSNAAYGAYFDRLYILQEGTIVYQGGRGPEGYRIT 6025409 Query 241 ELRHWLDRYRERL 253 ELR WLD+YRE L Sbjct 6025410 ELRDWLDQYRETL 6025448 >ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold34, whole genome shotgun sequence Length=5128957 Score = 320 bits (820), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 153/253 (60%), Positives = 204/253 (81%), Gaps = 6/253 (2%) Frame = +2 Query 1 RALKNALVCLLILPRFLVAAFMLWCLDFLCVRKRVLVHLQeraeeeeedaeeeeePLCIS 60 RALK+ +CL++LPRFL+AA M+W LDFLC+RK+VL+ + E ++ P+C+S Sbjct 1318553 RALKHTALCLMLLPRFLLAAVMMWLLDFLCIRKKVLLKM------GERQDSPDDPPVCVS 1318714 Query 61 DSSRMFSWESLKAVFHGHKLDYMKSARLGHAAPDSEVFPLAEPRRGRVLEFARGHRPLVL 120 DS++MF+ ESL+AV++G KLD++KSA LG AAP++EV + E R+ ++L+ +G RPL+L Sbjct 1318715 DSNKMFTLESLRAVWYGQKLDFLKSAHLGRAAPNTEVMLVQERRQVQILDCMKGKRPLIL 1318894 Query 121 SFGSCSXPPFMRRLKAFRRLVLRYADVADALLIYIEEAHPSDGWRSSDAPHQIRRHRSLE 180 +FGSCS PPFM RL AF+R+V +YAD+AD L++YIEEAHPSDGW SSDAP+QI +HR LE Sbjct 1318895 NFGSCS*PPFMTRLAAFQRVVSQYADIADFLVVYIEEAHPSDGWVSSDAPYQIPKHRCLE 1319074 Query 181 ERLSAARLMEREAPGCAVVADGMENAANSAYGAYFDRLYIVQDGRVVYQGGRGPEGFRIS 240 +RL AARLM E PG VV D M+N++N+AYGAYF+RLYIV+D RVVYQGGRGPEG+RIS Sbjct 1319075 DRLRAARLMLAEVPGSNVVVDNMDNSSNAAYGAYFERLYIVRDERVVYQGGRGPEGYRIS 1319254 Query 241 ELRHWLDRYRERL 253 ELR+WL++YR L Sbjct 1319255 ELRNWLEQYRSEL 1319293 >ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold36, whole genome shotgun sequence Length=4621905 Score = 135 bits (339), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 7/157 (4%) Frame = -2 Query 104 RRGRVLEFARGHRPLVLSFGSCSXPPFMRRLKAFRRLVLRYADVADALLIYIEEAHPSDG 163 + +L+F RPLV++FGS + PPF+ L AFR LV ++DVAD LL+YI+EAHPSDG Sbjct 2644490 KECHLLDFESSDRPLVVNFGSAT*PPFISHLPAFRELVEGFSDVADFLLVYIDEAHPSDG 2644311 Query 164 WRS---SDAPHQIRRHRSLEERLSAAR-LMEREA--PGCAVVADGMENAANSAYGAYFDR 217 W + I +H++LEERL AAR L+E + P C +VAD M+N AN AYG +R Sbjct 2644310 WVAPPMGSCSFDIPKHQNLEERLGAARKLIEHFSLPPQCQLVADCMDNNANVAYGVSNER 2644131 Query 218 LYIVQDGRVVYQGGRGPEGFRISELRHWLDR-YRERL 253 + IV+ ++ Y GG+GP + + +++ WL++ Y +RL Sbjct 2644130 VCIVKQRKITYLGGKGPFFYNLKDVQQWLEQSYGKRL 2644020 >ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold30, whole genome shotgun sequence Length=5717598 Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 48/69 (70%), Gaps = 1/69 (1%) Frame = -2 Query 161 SDGWRSSDAPHQIRRHRSLEERLSAARLMEREAPGCAVVADGMENAANSAYGAYFDRLYI 220 SDGW ++ I +H++LE+RLSAA+++ ++ P C VV D M + + YGA +RLY+ Sbjct 4280711 SDGWAFTNNID-INQHQNLEDRLSAAQILAQKEPLCPVVVDDMSDVSAIKYGALPERLYV 4280535 Query 221 VQDGRVVYQ 229 +Q G+VVY+ Sbjct 4280534 LQAGKVVYK 4280508 Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 27/53 (51%), Positives = 39/53 (74%), Gaps = 0/53 (0%) Frame = -1 Query 109 LEFARGHRPLVLSFGSCSXPPFMRRLKAFRRLVLRYADVADALLIYIEEAHPS 161 + F +R LVLSFGSC+ PPF+ +L F++LV ++DVAD L++YI EAH + Sbjct 4281495 VSFTADNRALVLSFGSCT*PPFIFKLDEFKQLVRDFSDVADFLVVYIAEAHST 4281337 Lambda K H a alpha 0.328 0.141 0.446 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 27605535136 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40