TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000612_2.0 # Protein # Iodothyronine deiodinase 3a (DIO3a) # Zebrafish Length=265 Score E Sequences producing significant alignments: (Bits) Value ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 348 2e-108 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 316 1e-97 ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 132 2e-33 ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 65.1 1e-10 >ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold34, whole genome shotgun sequence Length=5128957 Score = 348 bits (892), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 195/267 (73%), Positives = 222/267 (83%), Gaps = 5/267 (2%) Frame = +2 Query 1 GMEMLQGSAGVQSA--LKNAAVCVlllprfllaalmlclldflcIRRKLLLKMQEGAFSS 58 G EM+ S GV++A LK+ A+C++LLPRFLLAA+M+ LLDFLCIR+K+LLKM E S Sbjct 1318511 GKEMMHDSGGVKTARALKHTALCLMLLPRFLLAAVMMWLLDFLCIRKKVLLKMGERQ-DS 1318687 Query 59 PDDPPLRVSDSNKMFTLESLRAVWYGQKLDFFKSARLGGAAPNTEVFPLDGDARAAERIL 118 PDDPP+ VSDSNKMFTLESLRAVWYGQKLDF KSA LG AAPNTEV + R +IL Sbjct 1318688 PDDPPVCVSDSNKMFTLESLRAVWYGQKLDFLKSAHLGRAAPNTEVMLVQ--ERRQVQIL 1318861 Query 119 DYARGRRPLILNFGSCSXPPFMTRLSAFQRVARQYADIADSLLVYIEEAHPSDGWVSSDA 178 D +G+RPLILNFGSCS PPFMTRL+AFQRV QYADIAD L+VYIEEAHPSDGWVSSDA Sbjct 1318862 DCMKGKRPLILNFGSCS*PPFMTRLAAFQRVVSQYADIADFLVVYIEEAHPSDGWVSSDA 1319041 Query 179 PVQIPRHRCLEDRLRAAQMLHREAAGSAVVVDSMQNSCNAAYGAYFERLYIVKDATVVYQ 238 P QIP+HRCLEDRLRAA+++ E GS VVVD+M NS NAAYGAYFERLYIV+D VVYQ Sbjct 1319042 PYQIPKHRCLEDRLRAARLMLAEVPGSNVVVDNMDNSSNAAYGAYFERLYIVRDERVVYQ 1319221 Query 239 GGRGPEGYRIAELRDWLERYRSGLQES 265 GGRGPEGYRI+ELR+WLE+YRS L S Sbjct 1319222 GGRGPEGYRISELRNWLEQYRSELAHS 1319302 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 316 bits (810), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 170/255 (67%), Positives = 208/255 (82%), Gaps = 7/255 (3%) Frame = +3 Query 13 SALKNAAVCVlllprfllaalmlclldflcIRRKLLLKM--QEGAFSSPDDPPLRVSDSN 70 A+KNA VC++LLPRFL+AAL+ LLDFLCIRR++ +M QEG DPPL +SDSN Sbjct 6024708 KAIKNAIVCLVLLPRFLMAALIFWLLDFLCIRRRVFFRMKQQEG---DAIDPPLCISDSN 6024878 Query 71 KMFTLESLRAVWYGQKLDFFKSARLGGAAPNTEVFPLDGDARAAERILDYARGRRPLILN 130 ++F+LESL+AVW+G KLDF K+A LG APNTEV L+ R+ RILDYA+ +RPLILN Sbjct 6024879 RLFSLESLKAVWHGHKLDFLKAAHLGHGAPNTEVVQLEDQRRS--RILDYAKEKRPLILN 6025052 Query 131 FGSCSXPPFMTRLSAFQRVARQYADIADSLLVYIEEAHPSDGWVSSDAPVQIPRHRCLED 190 FGSC+ PPFM RL AF+ V +Q ADIADS++VYIEEAHPSDGW+S+DAP QIP HRCLED Sbjct 6025053 FGSCT*PPFMVRLKAFRGVVQQNADIADSVVVYIEEAHPSDGWMSTDAPYQIPTHRCLED 6025232 Query 191 RLRAAQMLHREAAGSAVVVDSMQNSCNAAYGAYFERLYIVKDATVVYQGGRGPEGYRIAE 250 RL AAQ++H E G VVVDSM+NS NAAYGAYF+RLYI+++ T+VYQGGRGPEGYRI E Sbjct 6025233 RLNAAQLMHLEVPGCPVVVDSMENSSNAAYGAYFDRLYILQEGTIVYQGGRGPEGYRITE 6025412 Query 251 LRDWLERYRSGLQES 265 LRDWL++YR L++S Sbjct 6025413 LRDWLDQYRETLEKS 6025457 >ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold36, whole genome shotgun sequence Length=4621905 Score = 132 bits (332), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/162 (42%), Positives = 97/162 (60%), Gaps = 6/162 (4%) Frame = -2 Query 102 TEVFPLDGDARAAERILDYARGRRPLILNFGSCSXPPFMTRLSAFQRVARQYADIADSLL 161 T V P A +LD+ RPL++NFGS + PPF++ L AF+ + ++D+AD LL Sbjct 2644523 TNVPPGAMSANKECHLLDFESSDRPLVVNFGSAT*PPFISHLPAFRELVEGFSDVADFLL 2644344 Query 162 VYIEEAHPSDGWVS---SDAPVQIPRHRCLEDRLRAAQMLHREAA---GSAVVVDSMQNS 215 VYI+EAHPSDGWV+ IP+H+ LE+RL AA+ L + +V D M N+ Sbjct 2644343 VYIDEAHPSDGWVAPPMGSCSFDIPKHQNLEERLGAARKLIEHFSLPPQCQLVADCMDNN 2644164 Query 216 CNAAYGAYFERLYIVKDATVVYQGGRGPEGYRIAELRDWLER 257 N AYG ER+ IVK + Y GG+GP Y + +++ WLE+ Sbjct 2644163 ANVAYGVSNERVCIVKQRKITYLGGKGPFFYNLKDVQQWLEQ 2644038 >ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold30, whole genome shotgun sequence Length=5717598 Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 29/156 (19%) Frame = -1 Query 43 IRRKLLLKMQEGAFSSPDDPPLRVSDSNKMF-TLESLRAVWYGQKLDFFKSARLGGAAPN 101 + +K++LKM E + +P + D F +++ ++A + + A +GG AP+ Sbjct 4281801 LTKKIILKMGEKT-TMTQNPNFKYEDWGLTFASVDFVKAASSHLWMSLGQDAFVGGEAPD 4281625 Query 102 TEVFPLDGDARAAERIL---------------------------DYARGRRPLILNFGSC 134 T V ++G + + L + R L+L+FGSC Sbjct 4281624 TSVVSMEGKKTSICKYLKGA*QDVGFCVLIRLYPSLCSQI*SCVSFTADNRALVLSFGSC 4281445 Query 135 SXPPFMTRLSAFQRVARQYADIADSLLVYIEEAHPS 170 + PPF+ +L F+++ R ++D+AD L+VYI EAH + Sbjct 4281444 T*PPFIFKLDEFKQLVRDFSDVADFLVVYIAEAHST 4281337 Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Frame = -2 Query 170 SDGWVSSDAPVQIPRHRCLEDRLRAAQMLHREAAGSAVVVDSMQNSCNAAYGAYFERLYI 229 SDGW ++ + I +H+ LEDRL AAQ+L ++ VVVD M + YGA ERLY+ Sbjct 4280711 SDGWAFTNN-IDINQHQNLEDRLSAAQILAQKEPLCPVVVDDMSDVSAIKYGALPERLYV 4280535 Query 230 VKDATVVYQ 238 ++ VVY+ Sbjct 4280534 LQAGKVVYK 4280508 Lambda K H a alpha 0.321 0.135 0.402 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 29838335772 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40