TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000614_2.0 # Protein # Iodothyronine deiodinase 2 (DIO2) # Zebrafish Length=257 Score E Sequences producing significant alignments: (Bits) Value ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 283 4e-86 ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 170 7e-47 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 159 4e-43 ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 67.0 4e-11 >ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold36, whole genome shotgun sequence Length=4621905 Score = 283 bits (724), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 142/195 (73%), Positives = 158/195 (81%), Gaps = 12/195 (6%) Frame = -2 Query 74 VKLGEAAPNSKVVKVTGINRCWS--ISGKTH---------NQCHLLDFESPDRPLVVNFG 122 VKLG APNSKVVKV R WS +S T+ +CHLLDFES DRPLVVNFG Sbjct 2644607 VKLGLEAPNSKVVKVPDSPR-WSSNLSNMTNVPPGAMSANKECHLLDFESSDRPLVVNFG 2644431 Query 123 SATXPPFISQLPVFRRMVEEFSDVADFLLVYIDEAHPSDGWVGPPMENFSFEVRKHRNLE 182 SAT PPFIS LP FR +VE FSDVADFLLVYIDEAHPSDGWV PPM + SF++ KH+NLE Sbjct 2644430 SAT*PPFISHLPAFRELVEGFSDVADFLLVYIDEAHPSDGWVAPPMGSCSFDIPKHQNLE 2644251 Query 183 ERMFAARTLLEHFSLPPQCQLVADCMDNNANIAYGVSYERVCIVQKNKIAYLGGKGPFFY 242 ER+ AAR L+EHFSLPPQCQLVADCMDNNAN+AYGVS ERVCIV++ KI YLGGKGPFFY Sbjct 2644250 ERLGAARKLIEHFSLPPQCQLVADCMDNNANVAYGVSNERVCIVKQRKITYLGGKGPFFY 2644071 Query 243 NLKDVRRWLEKCYGK 257 NLKDV++WLE+ YGK Sbjct 2644070 NLKDVQQWLEQSYGK 2644026 Score = 118 bits (295), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 3/78 (4%) Frame = -2 Query 1 MGLLSVDLLVTLQILPGFFSNCLFFVLYDSIVLVKRVVSLLSCSGS--TGEWQRMLTTAG 58 MG+ S DLLVTLQILPGFFSNCLF LYDS+VLVKR VS LSCS S +GEW+RMLT+AG Sbjct 2645951 MGMASEDLLVTLQILPGFFSNCLFLALYDSVVLVKRAVS-LSCSRSAGSGEWRRMLTSAG 2645775 Query 59 VRSIWNSFLLDAYKQVKL 76 +RSIWNSFLLDAYKQV + Sbjct 2645774 LRSIWNSFLLDAYKQVNV 2645721 >ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold34, whole genome shotgun sequence Length=5128957 Score = 170 bits (431), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 143/250 (57%), Gaps = 25/250 (10%) Frame = +2 Query 12 LQILPGFFSNCLFFVLYDSIVLVKRVVSLLSCSGST--------GEWQRMLTTAGVRSIW 63 L +LP F + L D + + K+V+ + + + +M T +R++W Sbjct 1318580 LMLLPRFLLAAVMMWLLDFLCIRKKVLLKMGERQDSPDDPPVCVSDSNKMFTLESLRAVW 1318759 Query 64 NSFLLDAYKQVKLGEAAPNSKVVKVTGINRCWSISGKTHNQCHLLDFESPDRPLVVNFGS 123 LD K LG AAPN++V+ V + Q +LD RPL++NFGS Sbjct 1318760 YGQKLDFLKSAHLGRAAPNTEVMLV-----------QERRQVQILDCMKGKRPLILNFGS 1318906 Query 124 ATXPPFISQLPVFRRMVEEFSDVADFLLVYIDEAHPSDGWVGPPMENFSFEVRKHRNLEE 183 + PPF+++L F+R+V +++D+ADFL+VYI+EAHPSDGWV + +++ KHR LE+ Sbjct 1318907 CS*PPFMTRLAAFQRVVSQYADIADFLVVYIEEAHPSDGWVS---SDAPYQIPKHRCLED 1319077 Query 184 RMFAARTLLEHFSLPPQCQLVADCMDNNANIAYGVSYERVCIVQKNKIAYLGGKGPFFYN 243 R+ AAR +L P +V D MDN++N AYG +ER+ IV+ ++ Y GG+GP Y Sbjct 1319078 RLRAARLMLAEV---PGSNVVVDNMDNSSNAAYGAYFERLYIVRDERVVYQGGRGPEGYR 1319248 Query 244 LKDVRRWLEK 253 + ++R WLE+ Sbjct 1319249 ISELRNWLEQ 1319278 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 159 bits (403), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 86/253 (34%), Positives = 144/253 (57%), Gaps = 25/253 (10%) Frame = +3 Query 9 LVTLQILPGFFSNCLFFVLYDSIVLVKRVVSLLSCSGSTG--------EWQRMLTTAGVR 60 +V L +LP F L F L D + + +RV + + R+ + ++ Sbjct 6024726 IVCLVLLPRFLMAALIFWLLDFLCIRRRVFFRMKQQEGDAIDPPLCISDSNRLFSLESLK 6024905 Query 61 SIWNSFLLDAYKQVKLGEAAPNSKVVKVTGINRCWSISGKTHNQCHLLDFESPDRPLVVN 120 ++W+ LD K LG APN++VV++ + + +LD+ RPL++N Sbjct 6024906 AVWHGHKLDFLKAAHLGHGAPNTEVVQL-----------EDQRRSRILDYAKEKRPLILN 6025052 Query 121 FGSATXPPFISQLPVFRRMVEEFSDVADFLLVYIDEAHPSDGWVGPPMENFSFEVRKHRN 180 FGS T PPF+ +L FR +V++ +D+AD ++VYI+EAHPSDGW+ + +++ HR Sbjct 6025053 FGSCT*PPFMVRLKAFRGVVQQNADIADSVVVYIEEAHPSDGWMS---TDAPYQIPTHRC 6025223 Query 181 LEERMFAARTLLEHFSLPPQCQLVADCMDNNANIAYGVSYERVCIVQKNKIAYLGGKGPF 240 LE+R+ AA+ L H + P C +V D M+N++N AYG ++R+ I+Q+ I Y GG+GP Sbjct 6025224 LEDRLNAAQ--LMHLEV-PGCPVVVDSMENSSNAAYGAYFDRLYILQEGTIVYQGGRGPE 6025394 Query 241 FYNLKDVRRWLEK 253 Y + ++R WL++ Sbjct 6025395 GYRITELRDWLDQ 6025433 >ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold30, whole genome shotgun sequence Length=5717598 Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 22/122 (18%) Frame = -1 Query 57 AGVRSIWNSFLLDAYKQVKLGEAAPNSKVVKVTG--INRCWSISGKTHNQ--CHLL---- 108 A +W S DA+ +G AP++ VV + G + C + G + C L+ Sbjct 4281690 AASSHLWMSLGQDAF----VGGEAPDTSVVSMEGKKTSICKYLKGA*QDVGFCVLIRLYP 4281523 Query 109 ----------DFESPDRPLVVNFGSATXPPFISQLPVFRRMVEEFSDVADFLLVYIDEAH 158 F + +R LV++FGS T PPFI +L F+++V +FSDVADFL+VYI EAH Sbjct 4281522 SLCSQI*SCVSFTADNRALVLSFGSCT*PPFIFKLDEFKQLVRDFSDVADFLVVYIAEAH 4281343 Query 159 PS 160 + Sbjct 4281342 ST 4281337 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Frame = -2 Query 160 SDGWVGPPMENFSFEVRKHRNLEERMFAARTLLEHFSLPPQCQLVADCMDNNANIAYGVS 219 SDGW + ++ +H+NLE+R+ AA+ L + P C +V D M + + I YG Sbjct 4280711 SDGWAF----TNNIDINQHQNLEDRLSAAQILAQK---EPLCPVVVDDMSDVSAIKYGAL 4280553 Query 220 YERVCIVQKNKIAY 233 ER+ ++Q K+ Y Sbjct 4280552 PERLYVLQAGKVVY 4280511 Lambda K H a alpha 0.324 0.140 0.440 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 28214480764 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40