TBLASTN 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 10,816 sequences; 612,774,492 total letters Query= SPP00000611_2.0 # Protein # Iodothyronine deiodinase 1 (DIO1) # Zebrafish Length=226 Score E Sequences producing significant alignments: (Bits) Value ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 175 4e-49 ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 120 4e-30 ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 118 4e-29 ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced geno... 83.6 4e-17 >ML171033.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold30, whole genome shotgun sequence Length=5717598 Score = 175 bits (444), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 90/188 (48%), Positives = 120/188 (64%), Gaps = 30/188 (16%) Frame = -1 Query 1 LRKLFVYISAVLMVCAAILRMSMLKLLSFISPGRMRKIHMKMGERTTMTQNPKFRYEDWG 60 L +L VY+S + C I + L +L FISP +KI +KMGE+TTMTQNP F+YEDWG Sbjct 4281900 LHRLMVYLSTASLFCFMIGLNAALFVLRFISPSLTKKIILKMGEKTTMTQNPNFKYEDWG 4281721 Query 61 PAFFSLAFIKTLFFVNWCSLGLEAFEGHSAPDSALITLDRQKTSVHRFLKG--------- 111 F S+ F+K W SLG +AF G APD+++++++ +KTS+ ++LKG Sbjct 4281720 LTFASVDFVKAASSHLWMSLGQDAFVGGEAPDTSVVSMEGKKTSICKYLKGA*QDVGFCV 4281541 Query 112 ---------------------NRPLVLSFGSCTXPPFLYKLDEFKQLVKDFSNVADFLIV 150 NR LVLSFGSCT PPF++KLDEFKQLV+DFS+VADFL+V Sbjct 4281540 LIRLYPSLCSQI*SCVSFTADNRALVLSFGSCT*PPFIFKLDEFKQLVRDFSDVADFLVV 4281361 Query 151 YLAEAHAT 158 Y+AEAH+T Sbjct 4281360 YIAEAHST 4281337 Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/69 (62%), Positives = 62/69 (90%), Gaps = 0/69 (0%) Frame = -2 Query 158 TDAWAFKNNVDISVHKNleerlaaartllKEDPPCPVVVDEMNNITASKYGALPERLYVI 217 +D WAF NN+DI+ H+NLE+RL+AA+ L +++P CPVVVD+M++++A KYGALPERLYV+ Sbjct 4280711 SDGWAFTNNIDINQHQNLEDRLSAAQILAQKEPLCPVVVDDMSDVSAIKYGALPERLYVL 4280532 Query 218 QSGKVIYQV 226 Q+GKV+Y+V Sbjct 4280531 QAGKVVYKV 4280505 >ML171037.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold34, whole genome shotgun sequence Length=5128957 Score = 120 bits (302), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/210 (36%), Positives = 125/210 (60%), Gaps = 5/210 (2%) Frame = +2 Query 18 ILRMSMLKLLSFISPGRMRKIHMKMGERTTMTQNPKFRYEDWGPAFFSLAFIKTLFFVNW 77 +L M+ LL F+ +K+ +KMGER +P D F+L ++ +++ Sbjct 1318601 LLAAVMMWLLDFLCI--RKKVLLKMGERQDSPDDPPVCVSDSN-KMFTLESLRAVWYGQK 1318771 Query 78 CSLGLEAFEGHSAPDS-ALITLDRQKTSVHRFLKGNRPLVLSFGSCTXPPFLYKLDEFKQ 136 A G +AP++ ++ +R++ + +KG RPL+L+FGSC+ PPF+ +L F++ Sbjct 1318772 LDFLKSAHLGRAAPNTEVMLVQERRQVQILDCMKGKRPLILNFGSCS*PPFMTRLAAFQR 1318951 Query 137 LVKDFSNVADFLIVYLAEAHATDAWAFKNN-VDISVHKNleerlaaartllKEDPPCPVV 195 +V ++++ADFL+VY+ EAH +D W + I H+ LE+RL AAR +L E P VV Sbjct 1318952 VVSQYADIADFLVVYIEEAHPSDGWVSSDAPYQIPKHRCLEDRLRAARLMLAEVPGSNVV 1319131 Query 196 VDEMNNITASKYGALPERLYVIQSGKVIYQ 225 VD M+N + + YGA ERLY+++ +V+YQ Sbjct 1319132 VDNMDNSSNAAYGAYFERLYIVRDERVVYQ 1319221 >ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold7, whole genome shotgun sequence Length=13290546 Score = 118 bits (295), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 114/192 (59%), Gaps = 3/192 (2%) Frame = +3 Query 36 RKIHMKMGERTTMTQNPKFRYEDWGPAFFSLAFIKTLFFVNWCSLGLEAFEGHSAPDSAL 95 R++ +M ++ +P D FSL +K ++ + A GH AP++ + Sbjct 6024804 RRVFFRMKQQEGDAIDPPLCISD-SNRLFSLESLKAVWHGHKLDFLKAAHLGHGAPNTEV 6024980 Query 96 ITL-DRQKTSVHRFLKGNRPLVLSFGSCTXPPFLYKLDEFKQLVKDFSNVADFLIVYLAE 154 + L D++++ + + K RPL+L+FGSCT PPF+ +L F+ +V+ +++AD ++VY+ E Sbjct 6024981 VQLEDQRRSRILDYAKEKRPLILNFGSCT*PPFMVRLKAFRGVVQQNADIADSVVVYIEE 6025160 Query 155 AHATDAWAFKNN-VDISVHKNleerlaaartllKEDPPCPVVVDEMNNITASKYGALPER 213 AH +D W + I H+ LE+RL AA+ + E P CPVVVD M N + + YGA +R Sbjct 6025161 AHPSDGWMSTDAPYQIPTHRCLEDRLNAAQLMHLEVPGCPVVVDSMENSSNAAYGAYFDR 6025340 Query 214 LYVIQSGKVIYQ 225 LY++Q G ++YQ Sbjct 6025341 LYILQEGTIVYQ 6025376 >ML171039.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold scaffold36, whole genome shotgun sequence Length=4621905 Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 7/124 (6%) Frame = -2 Query 108 FLKGNRPLVLSFGSCTXPPFLYKLDEFKQLVKDFSNVADFLIVYLAEAHATDAWAF---- 163 F +RPLV++FGS T PPF+ L F++LV+ FS+VADFL+VY+ EAH +D W Sbjct 2644469 FESSDRPLVVNFGSAT*PPFISHLPAFRELVEGFSDVADFLLVYIDEAHPSDGWVAPPMG 2644290 Query 164 KNNVDISVHKNleerlaaartllKE---DPPCPVVVDEMNNITASKYGALPERLYVIQSG 220 + DI H+NLEERL AAR L++ P C +V D M+N YG ER+ +++ Sbjct 2644289 SCSFDIPKHQNLEERLGAARKLIEHFSLPPQCQLVADCMDNNANVAYGVSNERVCIVKQR 2644110 Query 221 KVIY 224 K+ Y Sbjct 2644109 KITY 2644098 Lambda K H a alpha 0.326 0.138 0.423 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 22330385880 Database: genome.fa Posted date: Oct 26, 2019 7:49 PM Number of letters in database: 612,774,492 Number of sequences in database: 10,816 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40