------- SECIS element -- id:1 -- grade:B ---- Chromosome = KZ836445.1:subseq_8504678,100080_ Strand = - Positions = 7793 - 7717 Found by: Covels (score=6.75) SECISearch1.0 (pattern=default) Stem2 length = 9 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -13.75 ..(((((((...........(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcg----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...((((((...........([[(({(([(((((......--.........)))))]))}))]])..--..-.))))))... target CCUGGGGGCCUCauucUUAAUGACACUUAUCUCCCAAGUC--UGUGGGAGAGGAGAGGGUUGGAAGA--GG-AGUCCCUCAU **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KZ836445.1:subseq_8504678,100080_ Strand = + Positions = 17727 - 17813 Found by: Covels (score=7.44) SECISearch1.0 (pattern=default) Stem2 length = 9 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -11.0 ..(((((((.............(((((((((((((((..................))))))))))))))).........))))))).. model uucggucaugcg------UuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ((((((................([[((((({{(((((..................)))))}})))))]]).....-......)))))) target GAGUUGAACACCcaguugAUAAUGAUUGGGAAGCUGAAAGGAacaAAACAACUACUCAGCCCUCCAGGAGCUGAc-CAGAAGCAAUUU **** ^^ ****