------- SECIS element -- id:1 -- grade:B ---- Chromosome = KZ836374.1:subseq_6891231,100392_ Strand = - Positions = 59275 - 59194 Found by: SECISearch1.0 (pattern=default) Stem2 length = 11 Apical loop length = 8 Insertion in stem2 = 0, 1 Free Energy = -10.63 ..(((((((.............((((((((((.(.((((...............)))).).)).)))))))).........))))))).. model uucggucaugcg------UuaAUGAcGgccug-g-cccuAAAcCcuuuuuggggcggg-c-ca-ggcCuGAUGuuu-uuucaugaccggc ((([{({{(((...........([[(({(({((((((((.....--.-----..))))))))}.))}))]]).....-.)))}})}]))) target UGAAGCCUGGACaugaggUCAGUGAAUUGGACaGgCCUGAAGGG--A-----ACUGGGcUuGAaCUUGUGAGGCAUc-CUCCCAGGGUCA **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KZ836374.1:subseq_6891231,100392_ Strand = - Positions = 22696 - 22617 Found by: Infernal (score=11.09) Covels (score=12.21) Stem2 length = 10 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -15.27 ..(((((((...........(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc (({(((({(...........([[{((((([{(({((....-........))}))}])))))}]]).....-.-.)}))))})) target UGUGGGCCCUUUUUUGUGAAUGAAGCUCCACGGAACAGCC-CCCCUGGGGUCCCCGGGAGCCGAGGCCCG-C-UGUGCUCCCG **** ^^ ****