------- SECIS element -- id:1 -- grade:B ----
 Chromosome = KZ836350.1:subseq_19789446,103423_ Strand = + Positions = 20717 - 20790
 Found by:  SECISearch1.0 (pattern=default)
 Stem2 length = 10   Apical loop length = 11   Insertion in stem2 = 1, 0
 Free Energy = -11.97

         ..(((((((...........((((((((((.(((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         (([(([((............([[(((((((.((((......-..-----...)))))))))))]])..--..-..))]))]))
 target  GCAUGGGAUCCCccggAUGAUGACUCCUCUgAUGAGGAAGA-UA-----UUAUCAUAGAGGAGGAAAA--UG-AUUUACAGGC
                             ****             ^^                       ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KZ836350.1:subseq_19789446,103423_ Strand = + Positions = 37161 - 37230
 Found by:  Infernal (score=17.79) Covels (score=9.48)
 Stem2 length = 9   Apical loop length = 13   Insertion in stem2 = 0, 1
 Free Energy = -17.7

         ..(((((((.......(((((((((((((((.................)))))))).)))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccag-gcCuGAUGuuuuuucaugaccggc
         ..(((((((---....{[[({(((((((((------(((.......)))))))))).))})]]}..--....)))))))..
 target  CUCAGUUUC---UUCAUGAAACUUUCUAAC------CCUAUUUCACAGGGUUAGAGCAGAUGAUGG--AUGCGAAAUUGCU
                         ****                ^^                      ****                 

------- SECIS element -- id:3 -- grade:A ----
 Chromosome = KZ836350.1:subseq_19789446,103423_ Strand = - Positions = 47070 - 46991
 Found by:  Infernal (score=24.28) Covels (score=41.01) SECISearch1.0 (pattern=default)
 Stem2 length = 9   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -6.59

         ..(((((((.........(((((((((((((((.................)))))))))))))))........)))))))..
 model   uucggucaugcg--UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .(({((({(.........{[[{(({{(((((((.................)))))))}}))}]]}..--....)})))})).
 target  GUGACAGGUUGCGUUGAAUGAUGUCUUCCUUGUAAAUGGUGAGCCCACCAGCGAGGAUUACUGAUGC--AGACAGUUGAUGG
                           ****           ^^^                         ****