------- SECIS element -- id:1 -- grade:B ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = + Positions = 67713 - 67792
 Found by:  Covels (score=2.73) SECISearch1.0 (pattern=default)
 Stem2 length = 10   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -15.05

         ..(((((((.............((((((((((((.(((...............))).))))))))))))..........)))))))..
 model   uucggucaugcg------UuaAUGAcGgccuggc-ccuAAAcCcuuuuuggggcgg-gccaggcCuGAUGuu-u-uuucaugaccggc
         (((((.................([[(((((({(-[-(((.............)))-]-)}))))))]])......-....---)))))
 target  CAGGCAACAGGGgaagugCUUAUGAGGGGCUGA-g-GGCAACAGGAACAAAAGCU-a-UGGGCUCUGAGUGGgAg-CAGA---GCCUG
                               ****             ^^                        ****                   

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = + Positions = 30823 - 30904
 Found by:  SECISearch1.0 (pattern=default)
 Stem2 length = 8   Apical loop length = 16   Insertion in stem2 = 0, 0
 Free Energy = -5.4

         ..(((((((.............(((((((((((((((...............)))))))))))))))........)))))))...
 model   uucggucaugcg------UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccg-gc
         ..(({{(((.............([[(({(((({(((......-..........)))}))))}))]])..--....)))}}))...
 target  GAUUCAUGGGAUcucaggAGAGUGACCAGUCAGACCAAAAUG-ACAGGAAGAGGGUGUGGCCGGGAAUC--CAAGCUGCAAGaAC
                               ****          ^^^                        ****                  

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = + Positions = 52536 - 52614
 Found by:  Infernal (score=10.01) Covels (score=10.72) SECISearch1.0 (pattern=default)
 Stem2 length = 8   Apical loop length = 11   Insertion in stem2 = 0, 0
 Free Energy = -6.75

         ..(((((((..............(((((((((((((((...............))))))))))))))).........)))))))..
 model   uucggucaugcg-------UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ...([(((((.............([[{({({((((((......-..-----...))))))})})}]]).....-..)))))])...
 target  CCGUGUCCUGAGGGAGGCACUGAUGAUCUUUCUGCCUCAAAGA-GC-----CAUGGGCAGCAUGUGAGACAUG-GAUGGGAAAGCC
                                ****           ^^^                       ****                  

------- SECIS element -- id:4 -- grade:B ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = - Positions = 55270 - 55194
 Found by:  Infernal (score=11.46) Covels (score=13.71)
 Stem2 length = 11   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -19.22

         ..(((((((........(((((((((((((((.................)))))))))))))))........)))))))..
 model   uucggucaugcg-UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ....(((((........([[{((((({(((((((.............)))))))})))))}]])----....)))))....
 target  CUCAUUGAGGAGGGCGAUGAUGGGCGAACUUUCCAGGACAGUCUCCCGGAGAGUCCGCCCCGAA----CCUGUUCAGGAAA
                          ****                                       ****                 

------- SECIS element -- id:5 -- grade:B ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = + Positions = 55254 - 55326
 Found by:  Infernal (score=14.64) Covels (score=9.2)
 Stem2 length = 10   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -13.66

         ..(((((((.......(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         (((({({((---(...([[{(((((([(((......--.........)))]))))))}]])......-.-)))})}))))
 target  UCGCCCUCC---UCAAUGAGAGCUUCAUCAGCACCU--GGUCCCUGGUGAGGGAGCUGGAAGACCUG-C-AGGUGAGUGG
                         ****             ^^                      ****                   

------- SECIS element -- id:6 -- grade:A ----
 Chromosome = KZ836402.1:subseq_19079788,100338_ Strand = + Positions = 58013 - 58083
 Found by:  Infernal (score=38.9) Covels (score=34.73) SECISearch1.0 (pattern=default)
 Stem2 length = 11   Apical loop length = 10   Insertion in stem2 = 0, 0
 Free Energy = -24.4

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((({((((.....{[[{(((((((((((........-----..)))))))))))}]]}..--..))))}))))..
 target  CCCAGCAGCAGCCCCAUGAUGGCUGGAUCUGAAAUCCUA-----GAUGGGUCCAGCUUGAUGU--CUUUGCAGCUGCA
                         ****           ^^^                       ****