------- SECIS element -- id:1 -- grade:A ---- Chromosome = KZ836407.1:subseq_5198024,100320_ Strand = - Positions = 49958 - 49886 Found by: Infernal (score=11.53) Covels (score=16.65) Stem2 length = 8 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -18.47 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..(((((((---....{[[{(({({(((((..................)))))})}))}]]}..--..-.))))))).. target CCUGGGGAC---AGAAUGAAGCGCCCAGCGUCCCGGGAGCACCUCCCUCGCUGAGGGCCGACGC--CU-CGUCCCUGAG **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KZ836407.1:subseq_5198024,100320_ Strand = - Positions = 78035 - 77963 Found by: Infernal (score=12.4) Covels (score=4.07) Stem2 length = 9 Apical loop length = 16 Insertion in stem2 = 1, 0 Free Energy = -16.69 ..(((((((.......((((((((((.(((((..................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({((((((.......{[[{((((((.(((.------...............)))))))))}]]}..--..-.))))))})) target GGCAGCCCCCAACCAAUGAUGGGGCACGGCC------AGGGCAUUAGGGCCUGCCUGUUUCUGACCA--GC-UGGGGCUCUU **** ****