------- SECIS element -- id:1 -- grade:B ----
 Chromosome = KZ836306.1:subseq_44223088,100242_ Strand = - Positions = 67809 - 67729
 Found by:  Covels (score=2.33) SECISearch1.0 (pattern=default)
 Stem2 length = 10   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -6.29

         ..(((((((..........((((((((((.(((((...............))))).)))))))))).........)))))))..
 model   uucggucaugcg---UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggc-caggcCuGAUGuuu-uuucaugaccggc
         (([({((((..........([[({({(((((((((.....--........)))))))))})})]]).....-...))))})]))
 target  GUAUAUGUCACAgauCAUAUGACUCUGGGuGCAAUCAAAU--AUAGUAAUAUUGUaCUCUGUGGAACUCUu-AGGGGUAAAGAC
                            ****             ^^^                       ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KZ836306.1:subseq_44223088,100242_ Strand = - Positions = 70162 - 70077
 Found by:  SECISearch1.0 (pattern=default)
 Stem2 length = 12   Apical loop length = 16   Insertion in stem2 = 0, 1
 Free Energy = -12.46

         ..(((((((............((((((((((((.(((..................))).)))))).)))))).........)))))))..
 model   uucggucaugcg-----UuaAUGAcGgccuggc-ccuAAAcC---cuuuuuggggcgg-gccagg-cCuGAUGuuu-uuucaugaccggc
         ...((((((((..........([[[(([((((([-(((((............)))))-])))))]).)]]]).....-)-)))))))...
 target  UCUCUUUAGACAcccugUGCAUGAAAUGUCUACg-GGACAACuguAUGCAGAUGUCC-aGUAGAAaGUGGAAAAGCa-G-UUUGGAGUCA
                              ****              ^^                           ****                  

------- SECIS element -- id:3 -- grade:A ----
 Chromosome = KZ836306.1:subseq_44223088,100242_ Strand = - Positions = 49831 - 49754
 Found by:  Infernal (score=19.39) Covels (score=37.35) SECISearch1.0 (pattern=default)
 Stem2 length = 11   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -12.33

         ..(((((((.......(((((((((((((((.................))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ...({({(((--....{[[((((((((((((.................))))))))))))]]}.....-..)))})})...
 target  UCCUCACAGA--CAAAUGAGGUCGUGCUGGGAAUUCCCUCCCCAGGGAUCUGGCAUGACUGACAUGCA-GUUCUAUAAAUG
                         ****           ^^                          ****