------- SECIS element -- id:1 -- grade:B ----
 Chromosome = KZ836402.1:subseq_32907821,100293_ Strand = + Positions = 86970 - 87046
 Found by:  Infernal (score=11.38) Covels (score=1.09)
 Stem2 length = 8   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -20.97

         ..(((((((...........(((((((((((((((.................))))))))))))))).........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ...((((((...........([[[(({(({((((------((((.....))))))))}))}))]]]).....-.-.))))))...
 target  AUGUGACUUGCAUUAGCCAAUGAAAUGUGUGAGU------GGCUAUAUGAGCCACUUUCAGAUGGAAGCUUU-A-AGAGUCAGUG
                             ****                                       ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KZ836402.1:subseq_32907821,100293_ Strand = - Positions = 79228 - 79147
 Found by:  Infernal (score=11.73)
 Stem2 length = 8   Apical loop length = 19   Insertion in stem2 = 0, 0
 Free Energy = -12.43

         ..(((((((..............(((((((((((((((.................)))))))))))))))........)))))))..
 model   uucggucaugcg-------UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((((............{[[{(((((({({(...................)})}))))))}]]}----.)-))))))))..
 target  CCCAGUGAAACGAGCGCAUUUUAUGAAAGUAUUACAUGCAUGGCUCUUUACUUGGAACGCGGUACUAGAU----AG-UUUCACUGAG
                                ****                                       ****                 

------- SECIS element -- id:3 -- grade:A ----
 Chromosome = KZ836402.1:subseq_32907821,100293_ Strand = + Positions = 50345 - 50412
 Found by:  Infernal (score=27.12) Covels (score=24.97) SECISearch1.0 (pattern=default)
 Stem2 length = 9   Apical loop length = 9   Insertion in stem2 = 0, 0
 Free Energy = -11.62

         ..(((((((.......(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ...(((({(---....([[{(({(((((((......--------...)))))))}))}]])......-...)}))))...
 target  GUUGGAGCA---UUUAUGAUGGAACAUGGCCAAACU--------UCAGUCAUGUACCUGAAGCCAUG-GUUUCUUCCCCU
                         ****           ^^^                       ****