------- SECIS element -- id:1 -- grade:B ---- Chromosome = KZ836410.1:subseq_70483,100311_ Strand = - Positions = 94502 - 94429 Found by: Infernal (score=11.49) Covels (score=1.79) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -12.52 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(({({((((......{[[{({{((((((((.....--........))))))))}})}]]}..--...))))})})). target UACCAUGCUGUCUUAGUGAUCACUGCUUGGUAAUAG--AGCUUGAAAUCAGGCAACGUGAUGU--CCCCAGCUUUGUU **** ^^ **** ------- SECIS element -- id:2 -- grade:A ---- Chromosome = KZ836410.1:subseq_70483,100311_ Strand = + Positions = 51278 - 51355 Found by: Infernal (score=33.26) Covels (score=27.26) SECISearch1.0 (pattern=default) Stem2 length = 11 Apical loop length = 15 Insertion in stem2 = 0, 1 Free Energy = -20.76 ..(((((((.......(((((((((((((((...............))))))))).)))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuu-uuucaugaccggc (((((((((((.....{[[((((((((((((...............))))))))).)))]]}.....-)-)))))))))) target CAGAGAUUUGCAUUAAUGAAGACUACACAGAAAACCUUCAGGAGGAUUUGUGUGGUUCUGAUAUUUA-G-CAAAUUUUUG **** ^^^ ****