------- SECIS element -- id:1 -- grade:B ----
 Chromosome = KZ836507.1:subseq_4427724,100413_ Strand = + Positions = 63416 - 63488
 Found by:  Infernal (score=10.65) Covels (score=5.25)
 Stem2 length = 7   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -9.72

         ..(((((((..........(((((((((((.......................)))))))))))........)))))))..
 model   uucggucaugcg---UuaAUGAcGgccuggcccgAAAcCcuuuuuggggugggccaggcCuGAUGuuuuuucaugaccggc
         .((((((((..........{[[((((((((.................------))))))))]]}..--....)))))))).
 target  UCUGGUUUUUUGCAGCAAAUGAAAGGUUGGGUCUUCCCGCUACUGAG------CUGACCUUGACCC--UCCCAAGAUCAGC
                            ****                                     ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KZ836507.1:subseq_4427724,100413_ Strand = - Positions = 10627 - 10546
 Found by:  Infernal (score=10.99) SECISearch1.0 (pattern=default)
 Stem2 length = 9   Apical loop length = 21   Insertion in stem2 = 0, 0
 Free Energy = -14.62

         ..(((((((.......(((((((((((((((.................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ...((({{(((.....([[(((([(((((.....................)))))]))))]]).......-.)))}})))...
 target  CCAAGGCCUGGCUUUGUGAGGCUGGGAGGCCAAGUCCAACCCAGCAAGCACCUCCAAGCUGAGGGCCGAC-CCUGUCCCUCUG
                         ****           ^^                          ****                    

------- SECIS element -- id:3 -- grade:A ----
 Chromosome = KZ836507.1:subseq_4427724,100413_ Strand = - Positions = 49386 - 49314
 Found by:  Infernal (score=32.26) Covels (score=38.11) SECISearch1.0 (pattern=default)
 Stem2 length = 10   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -13.56

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .({({(({(.--....([[{((((((((({(...............)})))))))))}]])..--..-.)}))})}).
 target  CUACCCGGCA--CCUAUGACGGUCUGCCUGAAAACCAGCCCGCUGGUGGGGCAGACCCGAGAA--CU-CGGCGUGCAC
                         ****           ^^^                       ****