------- SECIS element -- id:1 -- grade:C ---- Chromosome = ULFQ01000050.1:subseq_1112184,105763_ Strand = - Positions = 29400 - 29322 Found by: Infernal (score=12.49) Stem2 length = 8 Apical loop length = 27 Insertion in stem2 = 0, 0 Free Energy = -14.63 ..(((((((.......(((((((((((((((.......................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--------cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..(((((((---(((.{[[{{((((((((...........................))))))))}}]]}----.)))))))))).. target CAAGCAAUG---UUAAUGAUUUUUAUUUUAGACAUGUAUUGCAUUACUACUGCAGGAAAAUGGAUUGAU----CUGACAUUGCUAA **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = ULFQ01000050.1:subseq_1112184,105763_ Strand = - Positions = 35880 - 35810 Found by: Infernal (score=10.37) Covels (score=3.38) Stem2 length = 8 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -8.1 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({({((((.--....([[(({(({((({((.....---.......))})))}))}))]])..--....))))})})) target GAAAACAGGU--CCAAUGAUGAUUCCUUCGGAAGUC---UGGACAACCAAAGCAACUGGAACU--AUUUCCUGCUCUC **** ^^ ****