------- SECIS element -- id:1 -- grade:B ---- Chromosome = ULFQ01000039.1:subseq_468474,219908_ Strand = - Positions = 104143 - 104053 Found by: Infernal (score=14.64) Stem2 length = 8 Apical loop length = 30 Insertion in stem2 = 1, 0 Free Energy = -7.75 ..(((((((........((((((((((.(((((..........................))))))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccug-gcccuAAAcC-----------cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ...(((((((.......([[{{(((((.(((..............................))))))))}}]]).....-..)))))))... target UAUUUUCAGGCAAAGCAUGACAGGUUUGAUUAGAAGCUCAGUUCUAUCUAUGGGUGCUGGAGAUAAACCCUGAACUAAA-GACCUGAGGUAG **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = ULFQ01000039.1:subseq_468474,219908_ Strand = - Positions = 26802 - 26727 Found by: Infernal (score=12.19) Covels (score=13.84) Stem2 length = 7 Apical loop length = 16 Insertion in stem2 = 1, 0 Free Energy = -6.6 ..(((((((...........(((((((((((((((...............)))))))).))))))).........))))))).. model uucggucaugcg----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccag-gcCuGAUGuuu-uuucaugaccggc .((((((((...........{[[[((((.--(((......-..........)))----))))]]]}.....-...)))))))). target CUUUGAUUCCAGCUAUGAGAUGAAGACAA--CUUCAAAAU-UGCAAACCAAAAG----UGUUGGAUGACUC-CCCGAAUCAAAU **** ^^^ ****