genewise output Score 558.07 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000035_1.0 36 GQRDYDLLVVGGGSGGLACAKE A G+ +YDLLV+GGGSGGLACAKE A GKNEYDLLVIGGGSGGLACAKE A:A[gct] A ULFR01000085.1:48131 gaagtgccgagggtggtgtgagGGTTCGTA Intron 1 AAGCTg gaaaaattttgggcggtcgcaa <1-----[48198:48820]-1> c ggtgcccttcaacttagtttaa c SPP00000035_1.0 60 QLGRKVAVVDYVEPSPQ TRWGLG Q G+KVAV+DYV+PSP+ T+WGLG QFGKKVAVLDYVDPSPR G:G[gga] TKWGLG ULFR01000085.1:48826 ctgaagggcgtggctcaGGTGAGAA Intron 2 CAGGAaatgcg atgaatcttaatacccg <1-----[48878:50000]-1> caggtg gtaggatcactgtttga caggtt SPP00000035_1.0 84 GTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHD GTCVNVGCIPKKLMHQAALLG ++DA +YGW + + + HD GTCVNVGCIPKKLMHQAALLGHSVRDAQHYGWNIPRHISHD ULFR01000085.1:50021 gatgaggtacaataccggccgctgcggcctgtaacccaacg gcgtatggtcaattaaccttgactgacaaaggatcgatgaa ggtgcgtctaggggcagtcgatgcatcattcgcacttctcc SPP00000035_1.0 125 RKMAEAVQNHVKSLNWGHRVQLQ MA+ VQN+VKSLNWGHR+QLQ W:W[tgg] SVMAKGVQNYVKSLNWGHRLQLQ ULFR01000085.1:50144 TGGTAAGAC Intron 3 CAGGtgagaggcatgattatgcatctc <2-----[50146:50787]-2> cttcagtaaatactaggagtata tggcaatacccacgtgacgagaa SPP00000035_1.0 149 D KVKYFNIKASFVDEHTVCGVAK D KVKYFN+K SFVD HT+ G AK D R:K[aaa] KVKYFNLKGSFVDAHTIRGGAK ULFR01000085.1:50858 gAAGTAAGTG Intron 4 CAGAagattacagatgggcaacggga a <2-----[50863:52128]-2> ataatataggttacactgggca t gcacctgacctgtaccctgaaa SPP00000035_1.0 173 GGKE ILLSADHIIIATGGRPRYPTH G KE LL+ADHI++ATGGRPRYP GNKE TLLTADHIVLATGGRPRYPRE ULFR01000085.1:52196 gaagGTAAGAA Intron 5 TAGaccaggcagcgaggacatcag gaaa<0-----[52208:53451]-0>cttccaatttccgggcgacga acgg cgccaccattcttcaaaccag SPP00000035_1.0 198 IEGALEYGITSDDIFWLKESPGK + GA E+GITSDDIFWLK SPGK VAGAQEFGITSDDIFWLKRSPGK ULFR01000085.1:53515 GTAACCT Intron 6 CAGggggcgtgaaaggattcaatcga <0-----[53515:54323]-0>tcgcaatgtcgaattgtagccga taataatgtatcctcgtaaccaa SPP00000035_1.0 221 LVVGASYVALECAGFLTGIGLDT ++ V+LEC GFLTG+GLD T:T[aca] HLLD---VSLECGGFLTGLGLDA ULFR01000085.1:54393 ACGTAAGTC Intron 7 CAGActcg gtcgtggtcagcgtgg <2-----[54395:59963]-2> atta tctagggttcgtgtac cgat tccgtcctctctagtt SPP00000035_1.0 245 TIMMRSIPLRGFDQ QMSSMVIEHMAS T+M+RSIPLRGFDQ QM+S+V HM + TVMIRSIPLRGFDQ QMASLVTSHMEA ULFR01000085.1:60025 agaaaaacccgtgcGTAGCTT Intron 8 TAGcagacgaacagg ctttggtctggtaa<0-----[60067:60200]-0>atcgttcgatac cggcgccgtaatcg agctgggccgag SPP00000035_1.0 271 HGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAI GTRFL+ C+P+R+++L +G+L+VTW+ +GKE + FDTV+WA+ SGTRFLKKCSPTRIKKLDNGRLRVTWKYGDSGKEKSDEFDTVMWAV ULFR01000085.1:60237 tgactcaatacaaaaacgagcccgatatggtgagatggtgagatgg cgcgttaaggccgtaataaggtgtcgaagacgaaacaatacttgct ccagtagaccatgcggaccagaggggatgcccaaagtattggggaa SPP00000035_1.0 317 RVPDTRSLNLEKAGVDTSPDTQK R PDT +L L++ GV T+P+T K G:G[ggc] RAPDTAALKLDRVGVKTNPETGK ULFR01000085.1:60375 GGTAAGGA Intron 9 AAGGCcgcgaggcacgcgggaaacgaga <1-----[60376:66064]-1> gccaccctatagtgtacacacga ctactactagttgtgactgagga SPP00000035_1.0 341 ILVDSREATSVPHIYAIGDVVE GRPE I+VDS E TS+PHI+AIGD+ E GRPE IIVDSAEVTSIPHIFAIGDITE GRPE ULFR01000085.1:66136 aaggtgggataccatgaggaagGTATAAA Intron 10 AAGgccg tttaccatcctcattctgatca<0-----[66202:67047]-0>ggca ccctatattgccttcacgcctg ccta SPP00000035_1.0 367 LTPIAIMAGRLLVQRLFGGSSDLMDYDN LTP AI +G+LL +RLFG SS+LMDYDN LTPTAIASGKLLARRLFGLSSELMDYDN ULFR01000085.1:67060 cacagagtgattgccttgcttgcagtgaGTGAGTA Intron 11 tcccctccgattcggttgtccattaaaa<0-----[67144:68174] agccattaggggtgggcctttacgtcct SPP00000035_1.0 395 VPTTVFTPLEYGCVGLSEEEAVARHGQEHVE VPTTVFTPLEYG +G+SEE+AV R+G +++E VPTTVFTPLEYGSIGISEEDAVHRYGPDNIE ULFR01000085.1:68172 CAGgcaagtaccgtgaagatgggggcctgcgaag -0>tcccttcctaaggtgtcaaactagagcaata gtaagcctagttctccaaattccattatcag SPP00000035_1.0 426 VYHAHYKPLEFTVAGRDASQCYVK VYHA YKPLEF VA RDA+QCY+K VYHAFYKPLEFVVAERDATQCYIK ULFR01000085.1:68268 GTAGGCT Intron 12 CAGgtcgttactgtggggaggacttaa <0-----[68268:68904]-0>taactaactatttcagaccagata accattacgatcgcaatttgccaa SPP00000035_1.0 450 MVCLREPPQLVLGLHFLGPNAGEVTQ MVCLRE Q +LGLHF+GPNAGEV Q MVCLREKDQQILGLHFIGPNAGEVIQ ULFR01000085.1:68977 GTAAGTT Intron 13 CAGagtccgagccacgcctagcaggggac <0-----[68977:69642]-0>ttgtgaaaaattgtattgcacgatta ggcgcaacggcgcttctcatttagca SPP00000035_1.0 476 GFALGIK GFALGIK GFALGIK ULFR01000085.1:69721 gtgcgaa gtctgta ccttacg // Making a A in phase 1 intron Making a G in phase 1 intron Making a W in phase 2 intron Making a K in phase 2 intron Making a T in phase 2 intron Making a G in phase 1 intron >ULFR01000085.1:subseq(3041680,119843).pep GKNEYDLLVIGGGSGGLACAKEAAQFGKKVAVLDYVDPSPRGTKWGLGGTCVNVGCIPKK LMHQAALLGHSVRDAQHYGWNIPRHISHDWSVMAKGVQNYVKSLNWGHRLQLQDKKVKYF NLKGSFVDAHTIRGGAKGNKETLLTADHIVLATGGRPRYPREVAGAQEFGITSDDIFWLK RSPGKTHLLDVSLECGGFLTGLGLDATVMIRSIPLRGFDQQMASLVTSHMEASGTRFLKK CSPTRIKKLDNGRLRVTWKYGDSGKEKSDEFDTVMWAVGRAPDTAALKLDRVGVKTNPET GKIIVDSAEVTSIPHIFAIGDITEGRPELTPTAIASGKLLARRLFGLSSELMDYDNVPTT VFTPLEYGSIGISEEDAVHRYGPDNIEVYHAFYKPLEFVVAERDATQCYIKMVCLREKDQ QILGLHFIGPNAGEVIQGFALGIK // >ULFR01000085.1:subseq(3041680,119843).[48131:69741].sp GGGAAGAATGAGTACGACCTCCTTGTTATCGGAGGAGGCTCTGGTGGATTGGCTTGTGCT AAAGAAGCTGCCCAGTTTGGAAAGAAGGTAGCTGTCCTAGACTATGTGGATCCTTCTCCG AGAGGAACCAAATGGGGGCTTGGTGGGACGTGTGTGAACGTGGGTTGCATTCCAAAGAAG TTGATGCACCAAGCGGCTCTCCTGGGACATTCGGTCCGAGATGCCCAACATTATGGCTGG AACATACCCCGTCATATCAGTCACGACTGGTCTGTGATGGCCAAAGGAGTTCAAAACTAC GTCAAATCCTTGAATTGGGGACACAGGTTACAGTTACAAGATAAAAAGGTCAAATACTTC AATCTGAAAGGCAGCTTTGTGGATGCACACACCATCCGTGGGGGAGCAAAAGGAAACAAG GAGACCCTGCTCACCGCAGACCACATAGTTCTTGCCACTGGTGGCAGACCAAGATACCCC AGAGAGGTTGCAGGAGCTCAAGAATTTGGGATTACAAGTGACGACATTTTCTGGCTTAAA AGATCCCCCGGAAAAACACACTTGCTAGATGTTTCCCTCGAGTGTGGCGGCTTTCTCACT GGCCTTGGATTGGATGCTACCGTGATGATCAGGAGCATCCCGCTTCGAGGATTTGACCAG CAAATGGCCAGTCTGGTGACGAGCCACATGGAAGCGTCCGGCACACGGTTTCTAAAGAAA TGCAGCCCAACTAGGATCAAGAAGCTAGACAACGGACGGCTACGGGTGACGTGGAAATAT GGGGACTCCGGCAAAGAAAAATCGGATGAATTTGATACGGTGATGTGGGCAGTAGGCCGC GCTCCAGACACTGCAGCCCTTAAACTGGATCGTGTGGGTGTGAAAACCAATCCGGAAACG GGGAAAATCATCGTCGATTCAGCTGAAGTTACTTCGATCCCCCATATTTTCGCAATCGGG GACATCACTGAGGGCCGCCCTGAACTAACGCCCACCGCAATTGCTTCAGGGAAGTTGTTG GCTCGGCGGTTGTTCGGCCTTTCTTCTGAACTCATGGATTACGACAATGTGCCTACAACA GTGTTCACCCCTCTAGAGTATGGTAGCATTGGCATCTCAGAAGAAGATGCTGTCCACCGA TATGGTCCAGATAACATAGAGGTATACCACGCATTTTATAAACCCTTGGAATTTGTCGTG GCCGAAAGAGATGCTACTCAGTGCTACATAAAAATGGTGTGCCTGCGCGAAAAAGACCAG CAGATCCTGGGCCTTCATTTCATTGGCCCAAATGCTGGTGAAGTGATCCAAGGCTTCGCT CTTGGAATCAAG // ULFR01000085.1:subseq(3041680,119843) GeneWise match 48131 69741 560.07 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 48131 48197 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 48198 48820 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 48821 48877 0.00 + 2 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 48878 50000 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 50001 50145 0.00 + 2 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 50146 50787 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 50788 50862 0.00 + 1 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 50863 52128 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 52129 52207 0.00 + 1 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 52208 53451 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 53452 53514 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 53515 54323 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 54324 54394 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 54395 59963 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 59964 60066 0.00 + 1 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 60067 60200 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 60201 60375 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 60376 66064 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 66065 66201 0.00 + 2 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 66202 67047 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 67048 67143 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 67144 68174 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 68175 68267 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 68268 68904 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 68905 68976 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise intron 68977 69642 0.00 + . ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 ULFR01000085.1:subseq(3041680,119843) GeneWise cds 69643 69741 0.00 + 0 ULFR01000085.1:subseq(3041680,119843)-genewise-prediction-1 //