------- SECIS element -- id:1 -- grade:A ----
 Chromosome = ULFR01000004.1:subseq_21529485,109104_ Strand = - Positions = 48704 - 48631
 Found by:  Infernal (score=27.82) Covels (score=29.23)
 Stem2 length = 10   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -13.87

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ....(((((---....{[[(((((((((((..................)))))))))))]]}..--....)))))....
 target  GUAAGUGUA---UUUUUGAAGUUAUGGCUCUGAACCUCAUCUGGAGGCGAGUCAUGGCUGAUGA--UUUCUAUACCAGU
                         ****            ^^                        ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = ULFR01000004.1:subseq_21529485,109104_ Strand = - Positions = 61456 - 61385
 Found by:  Infernal (score=18.55) Covels (score=10.81)
 Stem2 length = 10   Apical loop length = 12   Insertion in stem2 = 0, 0
 Free Energy = -11.44

         ..(((((((.......(((((((((((((((................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ((({(([((---....{[[[((((((((((------............))))))))))]]]}.......-...))]))})))
 target  UCACUAAAU---AAUAUGAAACGUGUACCU------UAGUCACUACACAGGUGCACGUGGAUACAGAUA-UUCAUGUAUUGG
                         ****                                      ****                    

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = ULFR01000004.1:subseq_21529485,109104_ Strand = + Positions = 84064 - 84143
 Found by:  Infernal (score=12.51) Covels (score=8.49)
 Stem2 length = 9   Apical loop length = 19   Insertion in stem2 = 0, 0
 Free Energy = -7.87

         ..(((((((...........(((((((((((((((.................)))))))))))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...({((((...........{[[((((({(((((...................)))))})))))]]}----....))))})...
 target  UACACACUGCUUACAUCUGAUGAAGGGACUGUAGCCCACAAGACUCAAUGCCACUAUAAUCUCUGAU----UCCACAGUUUAAC
                             ****          ^^                           ****