genewise output Score 320.28 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000025_1.0 3 LLLLLLVAASAMVRSEASANLGGVP-SKRLKMQYATGPLLKFQI L LLLLVA S A A GG+P K+L+M YATGPLLKFQI LALLLLVAVGL---SGAGAQPGGLPPGKKLRMAYATGPLLKFQI ULFR01000017.1:43677 cgcctcggggt aggggccggcccgaaccagtgagctcatca tctttttctgt ggcgcacggtccgaatgtcaccgcttatat gggggggggcg cctgtgactgttggaacgccccgggcgcgc SPP00000025_1.0 46 VSXGYRRVFEEYMRVISQRYPDI VSXGYRRVFEEYMRVISQRYPDI C:C[tgt] VSXGYRRVFEEYMRVISQRYPDI ULFR01000017.1:43800 TGGTGAGTG Intron 1 CAGTgttgtacgtggtacgaacctcga <2-----[43802:50043]-2> tcggaggttaaatgttgagacat tcaacgggtagcggttcggcacc SPP00000025_1.0 70 RIEGENYLPQPIY HIASFLSVFK RIEGENYLPQPIY HIASFLSVFK RIEGENYLPQPIY R:R[aga] HIASFLSVFK ULFR01000017.1:50114 cagggatccccatAGGTAAGTT Intron 2 CAGAcagttttgta gtagaaatcacta <2-----[50155:50548]-2> atccttctta ctagacctcacat tactcgacca SPP00000025_1.0 94 LVLIGLIIVGKDPFAFFGMQAPSIWQWGQENK LVLIG IIVGKDPFA+FGMQ P IWQWGQENK LVLIGFIIVGKDPFALFGMQTPGIWQWGQENK ULFR01000017.1:50580 cgcagtaaggagctgttgacacgatctgcgaa ttttgttttgaactcttgtaccgtgaggaaaa agaacctttcgttttatcgatatcgggaaatg SPP00000025_1.0 126 VYACMMVFFLSNMIENQCMSTGAFEI VYACMMVFFLSNMIENQCMSTGAFEI VYACMMVFFLSNMIENQCMSTGAFEI ULFR01000017.1:50676 GTATGAT Intron 3 TAGgtgtaagttcaaaagactataggtga <0-----[50676:52121]-0>tacgttttttgattaaagtccgctat atttggtccgccgtgcgtgaatataa SPP00000025_1.0 152 TLN VPVWSKLESGHLPSMQQLVQ TLN VPVWSKLESGHLPSMQQLVQ TLN D:D[gat] VPVWSKLESGHLPSMQQLVQ ULFR01000017.1:52200 ataGGTAAATT Intron 4 TAGATgcgttacgtgccctacccgc cta <1-----[52210:53143]-1> tctgcatacgatcctaatta tat caggtgggtgtttcggatta SPP00000025_1.0 176 ILDNEMKLNVHMDSIPHHRS ILDNEMKLNVHM+ +PHHRS ILDNEMKLNVHMEQMPHHRS ULFR01000017.1:53206 acgagaacagcagcacccat ttaaatatatataatcaagc ctttagactgtggagattaa // Making a C in phase 2 intron Making a R in phase 2 intron Making a D in phase 1 intron >ULFR01000017.1:subseq(19141158,103265).pep LALLLLVAVGLSGAGAQPGGLPPGKKLRMAYATGPLLKFQICVSXGYRRVFEEYMRVISQ RYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGFIIVGKDPFALFGMQTPGIWQWGQEN KVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLN VHMEQMPHHRS // >ULFR01000017.1:subseq(19141158,103265).[43677:53265].sp CTGGCGCTGCTGTTGCTGGTGGCGGTGGGCTTGAGCGGCGCTGGGGCTCAGCCAGGCGGT CTGCCTCCTGGGAAGAAACTACGCATGGCCTACGCCACCGGGCCGTTGCTCAAGTTCCAG ATCTGTGTTTCCTGAGGATACAGGCGGGTGTTTGAAGAGTACATGCGGGTTATTAGCCAG CGGTACCCAGACATCCGCATTGAAGGGGAAAACTACCTTCCCCAACCCATATATAGACAT ATAGCCTCTTTCTTGTCAGTCTTCAAACTAGTGCTAATAGGCTTCATTATTGTTGGCAAG GATCCTTTTGCTTTATTTGGCATGCAAACTCCAGGTATCTGGCAGTGGGGACAAGAAAAT AAGGTATATGCTTGTATGATGGTTTTCTTCCTGAGCAACATGATTGAGAACCAGTGTATG TCAACAGGTGCATTTGAAATAACTTTAAATGATGTCCCAGTGTGGTCTAAGCTGGAGTCT GGGCATCTTCCTTCCATGCAGCAACTTGTTCAAATCCTTGATAATGAAATGAAACTCAAT GTGCATATGGAGCAAATGCCACATCATAGATCA // ULFR01000017.1:subseq(19141158,103265) GeneWise match 43677 53265 322.28 + . ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise cds 43677 43801 0.00 + 0 ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise intron 43802 50043 0.00 + . ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise cds 50044 50154 0.00 + 1 ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise intron 50155 50548 0.00 + . ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise cds 50549 50675 0.00 + 1 ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise intron 50676 52121 0.00 + . ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise cds 52122 52209 0.00 + 0 ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise intron 52210 53143 0.00 + . ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 ULFR01000017.1:subseq(19141158,103265) GeneWise cds 53144 53265 0.00 + 2 ULFR01000017.1:subseq(19141158,103265)-genewise-prediction-1 //