------- SECIS element -- id:1 -- grade:B ---- Chromosome = ULFR01000024.1:subseq_13806600,118603_ Strand = - Positions = 24401 - 24323 Found by: Infernal (score=17.46) Covels (score=14.51) Stem2 length = 11 Apical loop length = 14 Insertion in stem2 = 0, 0 Free Energy = -19.37 ..(((((((.......(((((((((((((((...............)))))))))))))))...........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc (({((([((.......{[[[(((((((((((.....-.........)))))))))))]]]}.......-...))])))})) target CCGGGUAUUGUCAGAAUGAAAUCCCUGGCUAGGAGU-UAUGUAUGGUGGCCAGGGAUGGAUAAAGACA-UAGGGGACUGGG **** **** ------- SECIS element -- id:2 -- grade:C ---- Chromosome = ULFR01000024.1:subseq_13806600,118603_ Strand = + Positions = 36042 - 36113 Found by: Infernal (score=12.09) Covels (score=9.43) Stem2 length = 9 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -20.4 ..(((((((.......((((((((((.(((((................))))).)))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC-cuuuuuggggcgggc-caggcCuGAUGuuu-uuucaugaccggc ((({(((((---(...([[[(({{(([((((------(((......)))))))]))}}))]]]).....-..))))))}))) target UGCAGUGGG---UAGAUGAAGAUUCUAUUUU------CCUACCCACAGGGGAAGAGUUUUGGAGCUUUG-CAGCCCACAGCA **** ^^ ****