genewise output Score 268.06 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000006_1.0 5 LQASCLLSLLLAGFVSQSRGQEKSK M L+ + +LSLLLAG+ S GQE+ + + LKGAWILSLLLAGLFQPSLGQEQQE V ULFR01000007.1:44277 caggtacttctggttccacgcgccgGTAAGAC Intron 1 CAGg tagcgttctttcgttacgtgaaaaa<0-----[44352:50002]-0>t gaacgctcgcgttatgccgggaagg g SPP00000006_1.0 31 DCHGGISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYXGLTGQY DC+ + G+ ++YGA ++ G EYI F++Y GKY+LFVNVA+YXGLT QY DCYDSVKGSAHDYGAFSLSG-EYIAFQKYVGKYILFVNVATYXGLTAQY ULFR01000007.1:50006 gttgtgagtgcgtggttttg gtagtcatggatactgaggattgcagct agaactagccaaagctctcg aatctaaatgaattttatccaggtccaa tctcataaacttcgtctatt accccgatgggtcctatgctcaaaaaat SPP00000006_1.0 80 I LNALQEELAPFGLVILGFPCNQ + LNALQ L LVILGFPCNQ L E:E[gaa] LNALQNSLRTDRLVILGFPCNQ ULFR01000007.1:50150 cGGTAAGAA Intron 2 CAGAAcagccatcaagccgacgtctac t <1-----[50154:51712]-1> tactaactgcagttttgtcgaa t gtaaatagatcagtcaccacta SPP00000006_1.0 104 FGKQEPGENSEILPTL YVRPGGG FGKQEPG+NSEIL + YVRPGGG FGKQEPGQNSEILQGI K:K[aaa] YVRPGGG ULFR01000007.1:51781 tgacgcgcatgaccgaAAGTGAGTT Intron 3 CAGAtgacggg tgaaacgaacattagt <2-----[51831:52710]-2> atgcggg taaaatagttactaaa tcaagac SPP00000006_1.0 128 FVPNFQLFEKGDVNGEKEQKFYTFLK +VPNFQLF+KGDVNGE EQ++YTFLK YVPNFQLFQKGDVNGENEQQIYTFLK ULFR01000007.1:52733 tgcatcctcagggaggagccatatcaGTTTGTA Intron 4 TAG atcatattaagatagaaaaatactta<0-----[52811:53660]-0> tcctcactaatcatgatagatcccgg SPP00000006_1.0 154 NSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRT NSCPP E G + RLFW P+K+HDI+WNFEKFLV P G P+MRW HRT NSCPPVVETFGDTTRLFWSPLKIHDIKWNFEKFLVNPQGKPVMRWFHRT ULFR01000007.1:53661 attccgggatggaaactttctaacgaatatgattgaccgacgaattcca acgccttactgaccgttgcctataatagataatttacagacttggtagc cctaatgatttcagaccgatggctctggttgatgtttaagtggggtcga SPP00000006_1.0 203 TVSNVKMDILSYMRR VS VK DI+ YMR+ NVSTVKNDIIRYMRK ULFR01000007.1:53808 agtagaagaaataaa atcctaaattgatga ttctagttcaatgga // Making a E in phase 1 intron Making a K in phase 2 intron >ULFR01000007.1:subseq(28380108,103855).pep LKGAWILSLLLAGLFQPSLGQEQQEVDCYDSVKGSAHDYGAFSLSGEYIAFQKYVGKYIL FVNVATYXGLTAQYLELNALQNSLRTDRLVILGFPCNQFGKQEPGQNSEILQGIKYVRPG GGYVPNFQLFQKGDVNGENEQQIYTFLKNSCPPVVETFGDTTRLFWSPLKIHDIKWNFEK FLVNPQGKPVMRWFHRTNVSTVKNDIIRYMRK // >ULFR01000007.1:subseq(28380108,103855).[44277:53852].sp CTGAAAGGAGCCTGGATCCTTTCCTTGCTCTTGGCTGGTTTATTTCAGCCCAGCCTGGGG CAGGAACAACAGGAGGTGGATTGCTATGACTCAGTTAAAGGATCAGCCCATGATTACGGG GCTTTCTCTTTATCTGGTGAATACATCGCCTTCCAGAAATATGTGGGGAAGTATATCCTC TTTGTAAATGTGGCCACTTACTGAGGACTAACAGCACAATATCTTGAACTGAATGCACTA CAAAATTCACTGAGAACTGACCGACTGGTTATCCTAGGCTTCCCATGCAATCAATTTGGA AAACAAGAACCTGGACAGAATTCTGAAATCCTTCAAGGAATAAAATATGTCAGACCAGGG GGAGGCTATGTCCCCAATTTCCAACTCTTTCAAAAAGGTGACGTAAATGGGGAAAATGAA CAGCAAATTTACACCTTCCTGAAGAACTCCTGTCCACCAGTTGTGGAAACTTTTGGTGAC ACAACGAGACTCTTCTGGTCACCTTTGAAGATCCATGACATTAAGTGGAATTTTGAGAAA TTTTTGGTTAATCCTCAAGGAAAGCCTGTGATGAGGTGGTTTCACCGGACAAATGTTTCC ACTGTAAAGAATGATATCATAAGATATATGAGGAAA // ULFR01000007.1:subseq(28380108,103855) GeneWise match 44277 53852 268.06 + . ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise cds 44277 44351 0.00 + 0 ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise intron 44352 50002 0.00 + . ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise cds 50003 50153 0.00 + 0 ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise intron 50154 51712 0.00 + . ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise cds 51713 51830 0.00 + 2 ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise intron 51831 52710 0.00 + . ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise cds 52711 52810 0.00 + 1 ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise intron 52811 53660 0.00 + . ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 ULFR01000007.1:subseq(28380108,103855) GeneWise cds 53661 53852 0.00 + 0 ULFR01000007.1:subseq(28380108,103855)-genewise-prediction-1 //