Predicted by: exonerate Blastx evalue: 4e-19 Query protein: gi|844287341|gb|AKN04700.1| thioredoxin reductase 2, partial [Meleagris gallopavo] Positions on query: 114-450 Query length: 450 Target name: your_sequence Positions on target: 47706-47735,46762-46832,40156-40267,37329-37503,28997-29133,23679-23774,23363-23455,21932-22003,19983-20080,17607-17733 Strand: - Query TGGRPKYPTH <---Intron---> ITGALEYGITSDDLFWLKDSPGKT <---Intron---> LVVG |||||||||| < 873bp > | ||||||||||||||||/||||| < 6494bp > | Target TGGRPKYPTH IAGALEYGITSDDLFWLKESPGKT LTDI aggacatcac agggcgtgaaaggcttcagtcgaa taga cgggcaacca tcgctaagtcgaattgtaaccgac tcat taaaaattat tatgggtacatttccgaaattaa tattt Query ASYVSLECAGFLTGVGLDTAVMMRSIPLRGFDQ <---Intron---> QMASLVTEHMESYGTKFLKKC / |||||||||||/|||| ||/|||||||||| < 2652bp > ||/|||||||||||||||||| Target SPDVSLECAGFLTGIGLDTTVMIRSIPLRGFDQ QMSSLVTEHMESYGTKFLKKC tcggtcgtggtcagagtgaagaaaaacccgtgc catttgagcagttgaattaat ccatctagcgttcgtgtacctttggtctggtaa atccttcaatacagcattaag aattatgttttagctagttacgaattattgttg agataatgcgattcaatagat Query VPMKVEKLESGRLQVTWKNTDLGTEEMDSFDTVMWAVG <---Intron---> RVPDSETLNLEIVGVK /| ||||||| /|||||||||||||| ||||||||||| < 8195bp > ||||/ ||||| |||| Target IPTKVEKLESNKLQVTWKNTDLGTEETDSFDTVMWAVG RVPDTRTLNLETVGVK acaaggatgaaatcgataaagtgaggagttgagatggg cgcgaaacatgaggga tccataatagaatatcgaacatgcaacactacttgct ggtcacgctatactgta cacataaggccaaaccgattcgcaaaatctcggggaa cactccatctggatcga Query TNSETGKIIVDASEATSVPHIYAIGDITE <---Intron---> GRPELTPTAIAAGKLLARRLFGHSS |||||||||||||||||||||||/||||| < 5222bp > |||||||||||||||||||||| || Target TNSETGKIIVDASEATSVPHIYAVGDITE GRPELTPTAIAAGKLLARRLFGQSS aatgagaaagggaggatgccatggggaag gccgtacagagggaccgccctgctt cacacgatttacgaccctcatactgatca ggcatcccctccgattcggttgacc tttatagctttccatttttcttatacaag cctagacaaatgaaggtgtttcgta Query ELMDYDN <---Intron---> VPTTVFTPLEYGCVGLSEEKAVQCYGSDNVE <---Intron---> ||||||/ < 223bp > |||||||||||||||||||/|||||||||/| < 1359bp > Target ELMDYDS VPTTVFTPLEYGCVGLSEEEAVQCYGSDNIE gtagtga gcaagtactgtgtggctgggggcttgtgaag attaaag tcccttcctaaggtgtcaaactagagcaata aggctct attatctcgattttagaaagtgattaatttg Query VFHAYYKPLEFTAAERDAAQCYMK <---Intron---> MVCLREREQRILGLHFIGPNAGEVIQGFAL |/|||||||||| ||||| ||||| < 1851bp > |||||||||||||||||||||||||||||| Target VYHAYYKPLEFTVAERDATQCYMK MVCLREREQRILGLHFIGPNAGEVIQGFAL gtcgttactgtagggaggacttaa agttcgagccacgcctagcaggggacgtgc taacaaactatctcagaccagata ttgtgagaagttgtattgcacgattagtct actattatagtagtaatatactga ggcaagaggactcttctaatacattaattt Query GIK <---Intron---> CGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDATVTGCUG ||| < 2249bp > |||||||||||||||||||||||||||||||||||||||||| Target GIK CGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDATVTGCUG gaa tggatcccaaaagaccatgggaaatcaaactgtggagagttg gta ggccacattactgtaccgcaatcatatcagcgtacctcgggg ac atttcttaaggatctctcttaatcgattaattcgtaacaccat *