TBLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 3,184 sequences; 1,209,001,349 total letters Query= SPP00001034_2.0 # Protein # Glutathione peroxidase 7 (GPx7) # Chicken Length=128 Score E Sequences producing significant alignments: (Bits) Value PTFA01000081.1 Casuarius casuarius isolate B32419 scaffold_80, w... 182 1e-52 PTFA01000055.1 Casuarius casuarius isolate B32419 scaffold_54, w... 116 7e-30 PTFA01000118.1 Casuarius casuarius isolate B32419 scaffold_117, ... 46.6 3e-05 PTFA01000489.1 Casuarius casuarius isolate B32419 scaffold_488, ... 45.4 7e-05 PTFA01000256.1 Casuarius casuarius isolate B32419 scaffold_255, ... 44.3 2e-04 PTFA01000490.1 Casuarius casuarius isolate B32419 scaffold_489, ... 41.2 0.002 PTFA01000329.1 Casuarius casuarius isolate B32419 scaffold_328, ... 34.7 0.44 PTFA01000399.1 Casuarius casuarius isolate B32419 scaffold_398, ... 32.0 3.3 PTFA01000002.1 Casuarius casuarius isolate B32419 scaffold_1, wh... 31.6 4.6 PTFA01000396.1 Casuarius casuarius isolate B32419 scaffold_395, ... 30.8 7.5 PTFA01000137.1 Casuarius casuarius isolate B32419 scaffold_136, ... 30.8 8.4 >PTFA01000081.1 Casuarius casuarius isolate B32419 scaffold_80, whole genome shotgun sequence Length=3960531 Score = 182 bits (461), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 84/89 (94%), Positives = 88/89 (99%), Gaps = 0/89 (0%) Frame = +3 Query 2 VSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFARK 61 VSLVVNVASECG+TDSHYKALQQLQ+DLGPYHFNVLAFPCNQFGQQEPD+N+EIESFARK Sbjct 1168980 VSLVVNVASECGYTDSHYKALQQLQRDLGPYHFNVLAFPCNQFGQQEPDSNREIESFARK 1169159 Query 62 TYGASFPMFSKVAVSGAGAIPAFKYLIGE 90 TYGASFPMFSK AVSGAGAIPAFKYLIGE Sbjct 1169160 TYGASFPMFSKTAVSGAGAIPAFKYLIGE 1169246 Score = 80.5 bits (197), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 37/38 (97%), Positives = 38/38 (100%), Gaps = 0/38 (0%) Frame = +2 Query 91 TWNFWKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVRK 128 TWNFWKYLVDPNGKVVKAWDSTVSVEEIRP+VTELVRK Sbjct 1171088 TWNFWKYLVDPNGKVVKAWDSTVSVEEIRPYVTELVRK 1171201 >PTFA01000055.1 Casuarius casuarius isolate B32419 scaffold_54, whole genome shotgun sequence Length=5338051 Score = 116 bits (291), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 84/125 (67%), Gaps = 9/125 (7%) Frame = +1 Query 1 QVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFAR 60 + +LVVNVAS C TD +Y ALQ+L ++ GP HF VLAFPCNQFG+ EP +++EIESFA+ Sbjct 2037973 KATLVVNVASYCQHTDKNYIALQELHREFGPSHFTVLAFPCNQFGESEPSSSQEIESFAK 2038152 Query 61 KTYGASFPMFSKVAVSGAGAIPAFKYLIGETWNFWK--YLVDPNGKVVKAWDSTVSVEEI 118 YG +FP+F K+ + G+ A PAFK+LIG N++ Y N +V + S I Sbjct 2038153 GNYGVTFPVFHKIKILGSEAEPAFKFLIG---NYFPSVYCTACNCGIVSKFQSGF----I 2038311 Query 119 RPHVT 123 +P+++ Sbjct 2038312 KPNLS 2038326 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Frame = +1 Query 92 WNFWKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVRK 128 WNFWKYLV+P GKVVK W + I+P V L+R+ Sbjct 2041117 WNFWKYLVNPEGKVVKFWRPEEPIGTIKPEVASLIRQ 2041227 >PTFA01000118.1 Casuarius casuarius isolate B32419 scaffold_117, whole genome shotgun sequence Length=3204144 Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/34 (62%), Positives = 23/34 (68%), Gaps = 0/34 (0%) Frame = +3 Query 22 LQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEI 55 L LQ +LGPY VL FP NQFG+QEP N EI Sbjct 145992 LNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEI 146093 >PTFA01000489.1 Casuarius casuarius isolate B32419 scaffold_488, whole genome shotgun sequence Length=288360 Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats. Identities = 23/47 (49%), Positives = 27/47 (57%), Gaps = 0/47 (0%) Frame = +1 Query 1 QVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQ 47 +V LV NVAS G T + +LQ+ GP VL FPCNQFG Q Sbjct 151981 RVLLVSNVASL*GTTARDFVQFNELQQRYGPRGLVVLGFPCNQFGHQ 152121 >PTFA01000256.1 Casuarius casuarius isolate B32419 scaffold_255, whole genome shotgun sequence Length=1427201 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 21/46 (46%), Positives = 27/46 (59%), Gaps = 0/46 (0%) Frame = +3 Query 2 VSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQ 47 V ++ NVAS+ G TD +Y L L +LAFPCNQFG+Q Sbjct 735792 VCIITNVASK*GKTDVNYTQLVDLYARYAERGLRILAFPCNQFGKQ 735929 Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 27/41 (66%), Gaps = 1/41 (2%) Frame = +3 Query 47 QEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYL 87 QEP N +I++FA K YG F MFSK+ V+G A P + ++ Sbjct 736134 QEPGDNAQIKAFAEK-YGVKFDMFSKIDVNGDKAHPLWTWM 736253 >PTFA01000490.1 Casuarius casuarius isolate B32419 scaffold_489, whole genome shotgun sequence Length=293072 Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2 Query 1 QVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQ 47 +V L+ NVAS G T Y L QLQ P VL FPCNQFG Q Sbjct 150637 RVVLIENVASL*GTTVRDYTQLNQLQARY-PRRLVVLGFPCNQFGYQ 150500 Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/114 (24%), Positives = 44/114 (39%), Gaps = 33/114 (29%) Frame = -2 Query 47 QEPDTNKEIES---FARKTYG--ASFPMFSKVAVSGAGAIPAFKYLIGE----------- 90 QE TN+EI + + R G +F +F K V+G P F YL Sbjct 150301 QENCTNEEILNSLKYVRPGGGFEPNFTLFQKCQVNGQDTHPVFAYLKAHLPAPADDAVHL 150122 Query 91 -----------------TWNFWKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVR 127 +WNF K+LV P G+ + + + ++ P + L++ Sbjct 150121 MAEPRFVVWSPVRRADISWNFEKFLVGPEGEPFRRYSPRMPTAQLEPDIQRLLK 149960 >PTFA01000329.1 Casuarius casuarius isolate B32419 scaffold_328, whole genome shotgun sequence Length=951834 Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 32/66 (48%), Gaps = 3/66 (5%) Frame = -3 Query 37 LAFPCNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYLIGETWNFWK 96 LA+PC++ GQQ P E K Y S + + SG + A+ + G TW+ Sbjct 12844 LAYPCSKEGQQHPGLRWEDSYQQVKGYDFSPLLSTSETTSG---MSAYSGVFGHTWSVQT 12674 Query 97 YLVDPN 102 +LV P+ Sbjct 12673 HLVHPS 12656 >PTFA01000399.1 Casuarius casuarius isolate B32419 scaffold_398, whole genome shotgun sequence Length=567349 Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats. Identities = 18/55 (33%), Positives = 25/55 (45%), Gaps = 1/55 (2%) Frame = -1 Query 40 PCNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYLIGETWNF 94 PC + GQQ PD ++E E + G FP+FS V + P + E F Sbjct 424255 PCGKGGQQYPDLHQE-ERCQQAKRGDPFPLFSTVEATLGVVCPVLGSPVQERHGF 424094 >PTFA01000002.1 Casuarius casuarius isolate B32419 scaffold_1, whole genome shotgun sequence Length=14296948 Score = 31.6 bits (70), Expect = 4.6, Method: Composition-based stats. Identities = 23/61 (38%), Positives = 30/61 (49%), Gaps = 4/61 (7%) Frame = +3 Query 18 HYKALQQ--LQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAV 75 HYK +Q L +L P+ N+L FP F + NK IE R T +PM S + V Sbjct 5974680 HYKRQRQ*SL*INLAPFKLNILTFP*VSFQKLLMTENKRIEY--RLTCRIKWPMESYITV 5974853 Query 76 S 76 S Sbjct 5974854 S 5974856 >PTFA01000396.1 Casuarius casuarius isolate B32419 scaffold_395, whole genome shotgun sequence Length=593523 Score = 30.8 bits (68), Expect = 7.5, Method: Composition-based stats. Identities = 18/57 (32%), Positives = 26/57 (46%), Gaps = 1/57 (2%) Frame = -3 Query 40 PCNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYLIGETWNFWK 96 PC Q GQ P ++E E + G P+ S + G P + ETW++WK Sbjct 215761 PCGQEGQWCPGVHQE-EHRQQVEEGDPPPLLSSGEATSRGLRPVRGSPVRETWSYWK 215594 >PTFA01000137.1 Casuarius casuarius isolate B32419 scaffold_136, whole genome shotgun sequence Length=2935127 Score = 30.8 bits (68), Expect = 8.4, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (48%), Gaps = 2/42 (5%) Frame = +3 Query 2 VSLVVNVASECGFTDSHYKALQQ--LQKDLGPYHFNVLAFPC 41 VSL V + S CG SH + +Q Q L YHF PC Sbjct 2026155 VSLFVRLKSSCGVIASHLQYIQSGFFQ*ILNAYHFYSFFLPC 2026280 Lambda K H a alpha 0.319 0.134 0.414 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 10066812425 Database: genome.fa Posted date: Oct 19, 2018 9:06 AM Number of letters in database: 1,209,001,349 Number of sequences in database: 3,184 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40