TBLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 3,184 sequences; 1,209,001,349 total letters Query= SPP00000016_1.0 # Protein # Selenoprotein K (SelK) # Homo sapiens # Complete Length=94 Score E Sequences producing significant alignments: (Bits) Value PTFA01000114.1 Casuarius casuarius isolate B32419 scaffold_113, ... 52.8 6e-08 >PTFA01000114.1 Casuarius casuarius isolate B32419 scaffold_113, whole genome shotgun sequence Length=3351187 Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 25/35 (71%), Positives = 31/35 (89%), Gaps = 1/35 (3%) Frame = -2 Query 3 YISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLF 37 YI+ GQVLD++S++PWRLS ITDFFW IA+FVVL Sbjct 3259827 YIT-GQVLDNQSRAPWRLSAITDFFWSIADFVVLL 3259726 Lambda K H a alpha 0.325 0.138 0.420 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 10069518825 Database: genome.fa Posted date: Oct 19, 2018 9:06 AM Number of letters in database: 1,209,001,349 Number of sequences in database: 3,184 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40