------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 49770 - 49699 Found by: Infernal (score=16.61) Covels (score=21.74) Stem2 length = 8 Apical loop length = 11 Insertion in stem2 = 0, 0 Free Energy = -13.56 ..(((((((........(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ..(((({((........{[[{((({(({(((......-..-----...)))}))})))}]]}.....-.-.))})))).. target GUCUCUUACCACAUUAAUGAAAGGCUGGGCCCAAAAU-CU-----UAAGGCGUAACCUAGAUGGGUC-C-AGUUAGAGCC **** ^^^ ****