------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 49042 - 48962 Found by: Infernal (score=22.01) Covels (score=34.13) Stem2 length = 10 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -11.17 ..(((((((.......(((((((((((((((.................)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..([([((((......{[[{(({((((((((.................))))))))}))}]]}......-..))))])]).. target GACAAGCUGCACUGAAUGAUGUUGUCCUUAUAAAUGGUAAACAAACCAGUGAGGAUCACUGAUACUAGA-CAGUAGAUGGGG **** ^^^ ****