------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = + Positions = 55432 - 55504 Found by: Infernal (score=30.11) Covels (score=26.77) Stem2 length = 11 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -20.52 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (((((((((---....{[[[((((((((({((.............))})))))))))]]]}..--....))))))))) target UGGGAUCAU---GGUAUGAAUUGCCCUAGGUAAACCCUUCCAGGAUGGUUAGGGUAAGGAUGU--UCGGAUGAUCCUA **** ^^ ****