------- SECIS element -- id:1 -- grade:A ---- Chromosome = NEVG01000091.1:subseq_12569013,118837_ Strand = - Positions = 49406 - 49329 Found by: Infernal (score=24.71) Covels (score=25.9) Stem2 length = 10 Apical loop length = 16 Insertion in stem2 = 0, 0 Free Energy = -13.73 ..(((((((.......(((((((((((((((................)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..((([(((.--....{[[{((({(((((((................)))))))})))}]]}......-...)))]))).. target UUACUGUGCU--UUUUUGAUGUUCUGGCUCGGAACCUUACUGUGAGGUGAGCUACGACUGAUGGAUGC-CAUGCAAGGUUG **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = NEVG01000091.1:subseq_12569013,118837_ Strand = + Positions = 3622 - 3695 Found by: Infernal (score=10.66) Covels (score=10.12) Stem2 length = 9 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -15.39 ..(((((((..........(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcg---UuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..(((((((..........([[((({(((((((------............)))))))})))]])..--....))))))).. target UUUCCUAAAACAGGCACUGUGAGGGAAGGAGGG------ACUUGUUCAUUGCUCUUCUCCCUGAGGC--UGUAUUUAGGAUC **** ****