Blastx evalue: 6e-34
 Query name: gi|884950419|ref|XP_010862603.2| PREDICTED: glutathione peroxidase 3 [Esox lucius]
 Query range: 28-223  (total 228)

 Target: /data/www-rg/seblastian_results/57922864/tempfiles/temptarget.fasta
 Chromosome: CM008307.1:subseq_2640681,106845_ Strand: +
 Positions:
 -Exon 1  50057        50216
 -Exon 2  52960        53077
 -Exon 3  56746        56845
 -Exon 4  58622        58831

 Redox box: no

Query   LRQVCDPSKGGTIFDYKAKTLNGSRTVSLSEYRGKTVLIVNVATYUGLTFQYLE <---Intron---> LNALHEELKNFGFTVLGFPCNQFGKQEPSA
        | |||/    |/|/|| | |/|||  / | /| || |||/||||/|||||||/| <   2743bp   > |||||/|||/ |||/||||||||||||| |
Target  LLQVCNKDVDGSIYDYGANTINGSVHIPLRQYAGKYVLILNVATFUGLTFQYVE                LNALHDELKHMGFTILGFPCNQFGKQEPGA
        cccgtaaggggtatgtggaaaagagcacccctggatgcacaggattgcatctgg                cagccggcacagtaacgtctactgacgcgg
        ttatgaaatagctaaagcactaggtatctgaacgaattttatcctggtctaat                atactaaataatgtcttgtcgaatgaaacgc
        tggattacgcccacctagctacatgcctgggccgaccccgtggccaacccgtg                agtaatcgggcggcttcctcccgcgaggtgc
                                                     *                                                      

Query   NHELLASLK <---Intron---> YVRPGNGFIPNFILFEKGDVNGDTEQGLYTFLK <---Intron---> NSCPPVGDSFGDPNDRLFWQPLKIND
        |/|/| /|| <   3668bp   > ||||||||/||| |||/|||||| || |/|||| <   1776bp   > |/|||||||||/||/|||| ||//||
Target  NYEILPALK                YVRPGNGFVPNFQLFERGDVNGDHEQALFTFLK                NACPPVGDSFGNPNERLFWDPLRVND
        atgaccgta                tgccgagtgcatcctgagggaggcgcgctatca                agtccgggatgacagacttgccagag
        aaattccta                atgcgagttcatattaggatagaaaacttctta                acgcctgagtgacaagttgactgtaa
        ttacgtaa                gcccaccgctatcggtaattgcactgactcccgg                tctatgccctacccaggcgtgggccc
                                                                                                            

Query   IKWNFEKFLVGPDGKPLMRWFPRVPVSEVRTDVLKYFRQYLSQY
        ||||||||||||||||| |||||| /||||/|///  ||  ||/
Target  IKWNFEKFLVGPDGKPLRRWFPRVNISEVRSDIIRLIRQQYSQH
        aatatgatcggcggaccaattcagaatggctgaaccacccttcc
        tagataatttgcagactgggtcgtatcatgcattgttgaaacaa
        tggccggtggggcgggggggtgggctcagaccctcgttggtcgc
                                                    
 Sequence until next stop: 
TAA
 * 

 Distance CDS-SECIS: 1409 ; UGA-SECIS: 1859

------- SECIS element -- id:1 -- grade:A ----
 Chromosome = CM008307.1:subseq_2640681,106845_ Strand = + Positions = 60241 - 60314
 Found by:  Infernal (score=31.18) Covels (score=32.84)
 Stem2 length = 10   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -22.07

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .({(((({((--....([[{((((((((((..................))))))))))}]])..--..-))}))))}).
 target  GUGUGGCGUC--UGGAUGAAGGUCAGGUUUGAAAGCAGACCCUCUGCAAAGCCUGACUAGAAGC--UU-GGGGCCAGAG
                         ****           ^^^                        ****