Blastx evalue: 3e-72
 Query name: gi|992218370|ref|XP_015462663.1| PREDICTED: glutathione peroxidase 1-like [Astyanax mexicanus]
 Query range: 1-191  (total 191)

 Target: /data/www-rg/seblastian_results/372510921/tempfiles/temptarget.fasta
 Chromosome: your_sequence Strand: -
 Positions:
 -Exon 1  51765        51989
 -Exon 2  50000        50347

 Redox box: no

Query   MAAGMKKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLUGTTVRDYTQMNELHANYSDKGLVILGVPCNQFGHQ <---Intron---> ENGKNEEIL
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| <   1417bp   > |||||||||
Target  MAAGMKKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLUGTTVRDYTQMNELHANYSDKGLVILGVPCNQFGHQ                ENGKNEEIL
        agggaaattgctgacctggccatttcagaggcagaggtctgaagagtacaagccgattgagcgacggctactgcc                gagaaggac
        tccgtaataatccattcgattatcctagattttaatcctggcctgaacataatacaacaagttttgtcgaatgaa                aagaaaatt
        gcgtgggcccgctacccatggccctgggaaggagtagtcacggcgcctggcgcccccgcggcgcgagcccgcccg                gtcgcaacc
                                               *                                                            

Query   NCLKYVRPGNGFEPRFQLLEKVEVNGTNAHPLFEFLKEKLPFPSDNSMALMTDPKFIIWSPVCRNDVSWNFEKFLIGPDGEPFKRYSRNFLTSDIEADIK
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  NCLKYVRPGNGFEPRFQLLEKVEVNGTNAHPLFEFLKEKLPFPSDNSMALMTDPKFIIWSPVCRNDVSWNFEKFLIGPDGEPFKRYSRNFLTSDIEADIK
        atcatgccgagtgcctcccgagggagaagccttgtcagacctcagatagtaagcataatacgtaaggttatgatcagcgggctactaaattaagagggaa
        agtaatgcgagtacgtattaatatagcacacttattaaatctcgaactcttcacatttggctggaatcgataatttgcagactagaggattcgatacata
        tcggcctagcccgtccgggggcaattctctcgcgcgggggccctcccgcggaccgcccgcgtcgtccggttggtgttacaggtacccgccgctccgcccg
                                                                                                            

Query   ELLKKVK
        |||||||
Target  ELLKKVK
        gccaaga
        attaata
        gccggcg
               
 Sequence until next stop: 
TAA
 * 

 Distance CDS-SECIS: 169 ; UGA-SECIS: 622

------- SECIS element -- id:1 -- grade:A ----
 Chromosome = your_sequence Strand = - Positions = 49830 - 49761
 Found by:  Infernal (score=37.6) Covels (score=26.56)
 Stem2 length = 10   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -17.44
 Type = 1

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((---....{[[(((((((((((......---........)))))))))))]]}..--....)))))))..
 target  GCUGUUUAC---UCUAUGAAGGCGCCUCUUGAAAUC---UAUUGUGAGGGGGGUGUCUGAUGA--AAAUGUAAAUGUC
                         ****           ^^^                       ****