genewise output Score 19.21 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000027_1.0 211 GVQHVNFTNRPS G QHV F RPS GCQHVGFWRRPS NIVO01069066.1229377 gtccggttaact ggaatgtgggcc gtgttgcgagtt // >NIVO01069066.1.pep GCQHVGFWRRPS // >NIVO01069066.1.[229377:229412].sp GGGTGTCAGCATGTTGGGTTCTGGAGAAGGCCTTCT // NIVO01069066.1 GeneWise match 229377 229412 19.21 + . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 229377 229412 0.00 + 0 NIVO01069066.1-genewise-prediction-1 // genewise output Score 414.98 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000027_1.0 5 APVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALF APVTRQVSG AA P PSGP S QPLAAAVAELPVLDA G+ VPFG LF APVTRQVSGHAAPAPVPSGPASWQPLAAAVAELPVLDASGRPVPFGELF NIVO01069066.1-35249 gcgaccgagcggcgcgcagcgatcccggggggccgcggtgacgctggct cctcgatggaccccctcggccggactccctcatcttaccggctctgatt cgcgggcctcccacacacccgcggcgcccgcggtggcccggtggttggc SPP00000027_1.0 54 RERRAVVVFVR HFLCYICKEYVEDLA RERRA+VVFVR HFLCYICKEYVEDLA RERRAIVVFVR HFLCYICKEYVEDLA NIVO01069066.1-35102 cgccgaggtgcGTGAGCA Intron 1 CAGctcttatagtgggcg gaggctttttg<0-----[35069:34641]-0>attgatgaaataatc agcgtcgccgg tcgtcccgacaatgc SPP00000027_1.0 80 KIPRSFLQ EANVTLIVIGQSSYHHIE KIP+SFLQ EANVTLIVIGQSSYHHIE KIPKSFLQ EANVTLIVIGQSSYHHIE NIVO01069066.1-34595 aacaattcGTAAGTT Intron 2 AAGggagacagagctttccag atcagtta<0-----[34571:33679]-0>acatcttttgaccaaata accgtcaa aatctcagtagacctttg SPP00000027_1.0 106 PFCKLTGYSHEIYVDPEREIYKRLGM PFCKLTGYSHEIYVDPEREIYKRLGM PFCKLTGYSHEIYVDPEREIYKRLGM NIVO01069066.1-33624 GTAAATA Intron 3 CAGcttacagttcgatggcgagataatga <0-----[33624:33304]-0>ctgatcgacaatatacagataagtgt tctaatgtttacttttgaattaagag SPP00000027_1.0 132 KRGEEIASS QSPHIKSNLLSGSL KRGEEIASS QSPH+KSN+LSGS+ KRGEEIASS G:G[gga] QSPHVKSNILSGSI NIVO01069066.1-33225 aagggagttGGTAAGAT Intron 4 CAGGAcaccgataactgaa aggaatccc <1-----[33197:29755]-1> agcatacattcggt aataatcca gcctaaatacaact SPP00000027_1.0 156 QSLWRAVTGPLFDFQGDPAQQGGTLILGP +SLWRAVTGPLFDFQGDPAQQGGTLILGP RSLWRAVTGPLFDFQGDPAQQGGTLILGP NIVO01069066.1-29710 cactaggagcctgtcggcgccggacatgc ggtggctcgcttatagaccaaggctttgc gcggaaatctttttaacatgataactata SPP00000027_1.0 185 NNIHFIHRDRNRLDHKPINSVLQ NNIHFIH DRNRLDHKPINSVLQ G:G[ggt] NNIHFIHHDRNRLDHKPINSVLQ NIVO01069066.1-29623 GGTAAGCA Intron 5 TAGGTaaactaccgaaatgcacaatgtc <1-----[29622:23603]-1> aatattaaagagtaaactactta cccttacttgtggttacccttag SPP00000027_1.0 209 LVGVQHVNFTNRPSVIHV LVGVQHV+FT+RPSVIHV LVGVQHVDFTSRPSVIHV NIVO01069066.1-23531 cgggccggtaaactgacg ttgtaatatcggccttat taatgtgctacatatctg // Making a G in phase 1 intron Making a G in phase 1 intron >NIVO01069066.1.pep APVTRQVSGHAAPAPVPSGPASWQPLAAAVAELPVLDASGRPVPFGELFRERRAIVVFVR HFLCYICKEYVEDLAKIPKSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVDPERE IYKRLGMKRGEEIASSGQSPHVKSNILSGSIRSLWRAVTGPLFDFQGDPAQQGGTLILGP GNNIHFIHHDRNRLDHKPINSVLQLVGVQHVDFTSRPSVIHV // >NIVO01069066.1.[35249:23476].sp GCCCCGGTCACGCGGCAGGTCAGCGGTCACGCCGCCCCAGCCCCAGTCCCAAGCGGCCCC GCGAGCTGGCAGCCCCTGGCCGCCGCCGTGGCCGAGCTGCCTGTGCTGGACGCCTCCGGG AGGCCTGTGCCGTTTGGTGAGCTGTTCCGAGAGCGCCGGGCTATCGTGGTCTTCGTGCGG CATTTCCTGTGTTACATCTGCAAGGAATACGTAGAAGATCTGGCCAAAATCCCCAAGAGT TTCTTACAAGAAGCAAATGTCACTCTCATAGTGATTGGACAGTCATCCTACCATCATATT GAGCCTTTCTGTAAACTAACTGGGTATTCTCATGAAATCTATGTTGATCCTGAGAGAGAA ATTTATAAAAGATTGGGAATGAAAAGAGGTGAAGAAATTGCCTCCTCAGGACAGAGCCCC CATGTAAAATCAAATATACTCTCAGGAAGCATTCGGAGCCTGTGGAGAGCAGTAACTGGC CCTCTTTTTGATTTTCAAGGAGACCCAGCTCAGCAAGGTGGAACACTCATTTTAGGTCCA GGTAACAACATCCATTTTATACACCATGATAGGAATAGGTTGGATCATAAACCCATCAAC TCTGTTTTACAGCTTGTAGGAGTTCAGCATGTGGACTTTACAAGCAGACCTTCAGTTATC CATGTG // NIVO01069066.1 GeneWise match 35249 23478 414.98 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 35249 35070 0.00 - 0 NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise intron 35069 34641 0.00 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 34640 34572 0.00 - 0 NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise intron 34571 33679 0.00 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 33678 33625 0.00 - 0 NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise intron 33624 33304 0.00 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 33303 33198 0.00 - 0 NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise intron 33197 29755 0.00 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 29754 29623 0.00 - 2 NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise intron 29622 23603 0.00 - . NIVO01069066.1-genewise-prediction-1 NIVO01069066.1 GeneWise cds 23602 23478 0.00 - 2 NIVO01069066.1-genewise-prediction-1 //