------- SECIS element -- id:1 -- grade:B ---- Chromosome = your_sequence Strand = - Positions = 16954 - 16883 Found by: Infernal (score=14.53) Covels (score=1.58) Stem2 length = 10 Apical loop length = 10 Insertion in stem2 = 0, 1 Free Energy = -19.72 Type = 1 ..(((((((.......(((((((((((((((...................))))))))).)))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccagg-cCuGAUGuuu-uuucaugaccggc .((((({(((......([[(((((((((((------(((....-----))))))))))).)))]]).....-..)))}))))). target CAGAGAAUAACUUCCUUGAGGUCAAAUUCU------GUCAGAA-----GACAGAAUUUGAACUGAAGUCUA-UUUUAAUCUUUC **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 213911 - 213986 Found by: Infernal (score=10.17) Covels (score=1.73) Stem2 length = 8 Apical loop length = 23 Insertion in stem2 = 0, 0 Free Energy = -12.0 Type = 1 ..(((((((.......(((((((((((((((.....................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC------cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...((((((---....{[[{({(({(((((.......................)))))}))})}]]}----..-.))))))... target GAUGUUAAC---UACUUGAUGACCAUAAGCGCACAGCCCCCAUGUUCACUGGAGCUUGAGGACUGAU----AA-UGUUAACCCC **** ****