------- SECIS element -- id:1 -- grade:A ----
 Chromosome = your_sequence Strand = + Positions = 86296 - 86373
 Found by:  Infernal (score=31.23) Covels (score=24.94)
 Stem2 length = 10   Apical loop length = 15   Insertion in stem2 = 0, 1
 Free Energy = -16.46
 Type = 1

         ..(((((((.......(((((((((((((((...............))))))))).)))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuu-uuucaugaccggc
         (((((((((((.....{[[(({(((((((((...............))))))))).}))]]}.....-)-))))))))))
 target  CAAAGAUUUGCAUUAAUGAAGACUACACAGAAAACCUUCCUGAGGAUUUGUGUAGACCUGAUAUUUA-G-CAGAUUUUUG
                         ****           ^^^                        ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = your_sequence Strand = - Positions = 40855 - 40774
 Found by:  Infernal (score=20.64) Covels (score=14.7)
 Stem2 length = 9   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -13.43
 Type = 1

         ..(((((((................(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg---------UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((................{[[[(((((((((.......--..........)))))))))]]]}..--..-.)))))))..
 target  GAAUUACCAAUAGCCCCAGAAUGAAUGAAGCGGCUGGGCCAAAGC--AGAUAUGACACUCAGUUGUGGAUGU--GU-CUGGUGAUGA
                                  ****           ^^^                       ****