genewise output Score 21.07 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000284_2.0 232 EEVGDDALEDPMPQL E+ G LEDP+PQL EKQGRSCLEDPQPQL NIVO01076485.1:77648 gacgattcggccccc aaaggcgtaacacat gaagactcgtcgcgt // >NIVO01076485.1:subseq(810170,121033).pep EKQGRSCLEDPQPQL // >NIVO01076485.1:subseq(810170,121033).[77648:77692].sp GAGAAACAAGGGAGATCCTGTCTCGAGGATCCCCAGCCCCAGCTT // NIVO01076485.1:subseq(810170,121033) GeneWise match 77648 77692 21.07 + . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 77648 77692 0.00 + 0 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 // genewise output Score 584.11 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000284_2.0 1 SALVFTQLEPYMDENFISRAFATMGETVMSVKIIRNRLT SALVFTQLEPYMDENFISRAFATMGETVMSVKIIRNRLT SALVFTQLEPYMDENFISRAFATMGETVMSVKIIRNRLT NIVO01076485.1-71033 tgcgtaccgctaggatatagtgaaggagaagaaacacca cctttcatacataaattcgctcctgacttgtattgagtc tttgtggggccgtgccccacttcgggaggccatcaccct SPP00000284_2.0 40 IPAGYCFVEFADLATAEKCLHKI IPAGYCFVEFADLATAEKCLHKI G:G[ggg] IPAGYCFVEFADLATAEKCLHKI NIVO01076485.1-70916 GGGTTTGTC Intron 1 CAGGacggtttggtggtgaggattcaa <2-----[70914:64944]-2> tccgagttatcatcccaagtaat cgtccctaacatgcatggtgtac SPP00000284_2.0 64 NGKPLPGATP AKRFKLNYATYGKQPD NGKPLPGATP AKRFKLNYATYGKQPD NGKPLPGATP AKRFKLNYATYGKQPD NIVO01076485.1-64873 agacccggacGTAAGGA Intron 2 CAGgactacatgatgaccg agactcgccc<0-----[64843:64233]-0>cagtataaccagaaca cgactaacat agttagtccttgagat SPP00000284_2.0 90 N PEYSLFVGDLTPDVDDGMLYEF N PEYSLFVGDLTPDVDDGMLYEF N S:S[agc] PEYSLFVGDLTPDVDDGMLYEF NIVO01076485.1-64184 aAGGTAAGTA Intron 3 CAGCcgttctgggcacgggggactgt a <2-----[64179:61918]-2> caactttgatccataagttaat c taccctggtgcatgctcggtgc SPP00000284_2.0 114 FVKVYPSCRGGKVVLDQTGVS GY FVKVYPSCRGGKVVLDQTGVS GY FVKVYPSCRGGKVVLDQTGVS K:K[aag] GY NIVO01076485.1-61850 tgagtcttcggaggtgcaggtAAGTAAGGC Intron 4 CAGGgt ttataccggggatttaacgtc <2-----[61785:60275]-2> ga ccacccccgacggtgcgacgt tt SPP00000284_2.0 138 GFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK GFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK GFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK NIVO01076485.1-60267 gtgataggcgcacgcagtcggagcgtacgccaggaca gttatcaataaagctcagagctgtgcactgtgtctca ttgacatggaggacgagcgacaaggtaagggcgccca SPP00000284_2.0 175 SRVKPVEYSQMYSYSYNQYYQQY SRVKPVEYSQMYSYSYNQYYQQY A:A[gcg] SRVKPVEYSQMYSYSYNQYYQQY NIVO01076485.1-60156 GCGTGAGTC Intron 5 AAGGacgacggtacatatatacttcct <2-----[60154:57253]-2> ggtactaagatagagaaaaaaaa ctggagattagctccccgtcggc SPP00000284_2.0 199 QNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ QNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ QNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ NIVO01076485.1-57182 cattgctgtgcaagatatatcctgtacaaac aaaacaggaaaacggagagacaagacagcta gccccggctcgcacccccctcgccccgccgg SPP00000284_2.0 230 TYEEVGDDALE TYEEVGDDALE TYEEVGDDALE NIVO01076485.1-57089 GTAACCA Intron 6 CAGatgggggggtg <0-----[57089:56885]-0>caaatgaacta gtaacattaga SPP00000284_2.0 241 PMPQLDVTEANKEFMEQSEELYD PMPQLDVTEANKEFMEQSEELYD D:D[gac] PMPQLDVTEANKEFMEQSEELYD NIVO01076485.1-56851 GGTAAGAA Intron 7 CAGACcacccggaggaagtagcaggctg <1-----[56850:50110]-1> ctcatatcacaaattaagaataa cggggtgcgccggcgggcgggct SPP00000284_2.0 265 ALMDCHWQPLDTV ALMDCHWQPLDTV ALMDCHWQPLDTV NIVO01076485.1-50038 gcagtctcccgag cttagagactact gggcttggtgcag // Making a G in phase 2 intron Making a S in phase 2 intron Making a K in phase 2 intron Making a A in phase 2 intron Making a D in phase 1 intron >NIVO01076485.1:subseq(810170,121033).pep SALVFTQLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKASRVKP VEYSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDALE DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTV // >NIVO01076485.1:subseq(810170,121033).[71033:49998].sp TCTGCTCTTGTGTTTACGCAGCTGGAGCCCTACATGGATGAGAACTTCATCTCCAGAGCC TTTGCTACCATGGGGGAGACAGTGATGAGCGTCAAAATTATCCGAAACCGCCTCACTGGG ATCCCGGCTGGCTACTGCTTTGTAGAATTCGCAGATTTGGCCACAGCTGAGAAGTGTTTG CATAAAATCAACGGGAAACCCCTTCCAGGAGCCACACCTGCAAAGCGTTTTAAACTGAAT TACGCCACTTATGGGAAACAGCCAGATAACAGCCCTGAATACTCCCTCTTTGTGGGGGAT CTGACCCCAGATGTGGACGATGGCATGCTGTATGAGTTCTTCGTCAAAGTCTACCCCTCC TGCCGGGGAGGCAAGGTGGTTTTGGACCAGACAGGCGTGTCTAAGGGTTATGGTTTTGTG AAATTCACAGATGAGCTGGAACAGAAGCGAGCCCTGACAGAGTGCCAGGGAGCCATAGGA CTGGGGTCTAAACCAGTGCGGCTGAGCGTGGCCATCCCCAAAGCGAGCCGTGTGAAGCCA GTGGAATATAGTCAAATGTACAGTTACAGCTACAACCAGTATTACCAGCAGTACCAGAAC TACTACGCCCAGTGGGGCTATGACCAGAACACAGGCAGCTACAGCTACAGCTATCCCCAG TACGGCTACACCCAGAGCACCATGCAGACGTATGAAGAAGTCGGAGATGATGCATTGGAA GACCCCATGCCGCAGCTGGATGTGACCGAGGCCAACAAGGAGTTCATGGAGCAGAGCGAG GAGCTGTACGATGCGCTGATGGACTGTCATTGGCAGCCTCTGGACACAGTG // NIVO01076485.1:subseq(810170,121033) GeneWise match 71033 50000 584.11 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 71033 70915 0.00 - 0 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 70914 64944 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 64943 64844 0.00 - 1 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 64843 64233 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 64232 64180 0.00 - 0 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 64179 61918 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 61917 61786 0.00 - 1 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 61785 60275 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 60274 60155 0.00 - 1 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 60154 57253 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 57252 57090 0.00 - 1 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 57089 56885 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 56884 56851 0.00 - 0 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise intron 56850 50110 0.00 - . NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 NIVO01076485.1:subseq(810170,121033) GeneWise cds 50109 50000 0.00 - 2 NIVO01076485.1:subseq(810170,121033)-genewise-prediction-1 //