genewise output Score 21.05 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000283_2.0 206 AWEHHSLAVQSPACASEAR AWE S A+Q P C S R AWETASRALQLPPCPSRTR NIVO01034609.1:38912 gtgagacgccccctctaac cgaccggctatccgccgcg ggaaccaacgcaccgcgcc // >NIVO01034609.1:subseq(2421749,113318).pep AWETASRALQLPPCPSRTR // >NIVO01034609.1:subseq(2421749,113318).[38912:38968].sp GCGTGGGAAACAGCCAGCCGAGCACTCCAGCTCCCACCCTGCCCGTCCAGGACCCGC // NIVO01034609.1:subseq(2421749,113318) GeneWise match 38912 38968 21.05 + . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 38912 38968 0.00 + 0 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 // genewise output Score 716.77 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000283_2.0 1 MKMGEDVRGAHSERPQKLVLCVLCGLPAAGKSTFARALRHWLQQELGWA MKMGEDVRGAHSE PQKLVLCVLCGLPAAGKSTFARALRH LQQELGWA MKMGEDVRGAHSEGPQKLVLCVLCGLPAAGKSTFARALRHQLQQELGWA NIVO01034609.1-63318 aaaggggaggcaggccacgctgctgccgggatatgcgcacccccgcgtg tatgaatggcagagcaatttgttggtcccgacctcgctgaataaatggc gggggccaagccagaagaccttcccgcgaagatcgcccacgaggagcgg SPP00000283_2.0 50 VGVVAYDDVMPEAVLEKASASPL PSQ VGVVAYDDVMPEAVLEKASA PL PSQ VGVVAYDDVMPEAVLEKASARPL PSQ NIVO01034609.1-63171 gggggtgggacgggcgagagcctGTCAGTA Intron 1 CAGctc tgttcaaattcacttaacgcgct<0-----[63102:60786]-0>cca gccccttccggagctggacacag aca SPP00000283_2.0 76 WKLFRQELLKFLEHFLLAVINGCQMSAPPSKTEAMWKDFITCLKDQDLI WKL+RQELLK+LEHFLLAVINGCQMSAP S+TEAMWKDFITCLKDQDLI WKLLRQELLKYLEHFLLAVINGCQMSAPASRTEAMWKDFITCLKDQDLI NIVO01034609.1-60776 tatcccgctatcgcttcggaagtcatgcgaaaggatagtaattagcgca gattgaattaataatttcttaggatccccggcactgaattcgtaaaatt gagtcgagggctaccggtcttgtggtcaccgtacgggttaccggtatga SPP00000283_2.0 125 SSAAVEAQALYPLTKTAVSRPLLLILDDNFYYQ SSAAVEAQ+LYPLTKTAVSRPLLLILDDNFYYQ SSAAVEAQSLYPLTKTAVSRPLLLILDDNFYYQ NIVO01034609.1-60629 ttgggggctctctaaaggtaccctatggatttc cccctacactactcacctcgctttttaaataaa ttattgcgtcccaggttgtatgtgtatcctcta SPP00000283_2.0 158 SSGFCQLFLDCALETCLQRNAQR S GFCQLFLDCALETCLQRNAQR N:N[aat] SLGFCQLFLDCALETCLQRNAQR NIVO01034609.1-60530 AGTATGAG Intron 2 CAGATttgttccttgtgcgatccaagca <1-----[60529:60078]-1> ctgtgatttagctacgtagacag aactcgctatttcgctaggtcga SPP00000283_2.0 182 PRPLPAETIHQMGNKIEKPNPEKNAWEHHSLAVQSPACASEA PRPLPAETIHQMG+KIEKPNPEKNAWEHHSLA+QSPACASEA PRPLPAETIHQMGSKIEKPNPEKNAWEHHSLAIQSPACASEA NIVO01034609.1-60006 cccccggaaccagaaagacacgaagtgccacgacacgtgtgg cgctccactaatggataacacaaacgaaagtctagccgccac aaagtcgcccggacaaagcctgattgaccccatgtaattagc SPP00000283_2.0 224 LKLTDLLITALENPIKHVEENLE LKLTDLLITALENP+K+VEENLE R:R[agg] LKLTDLLITALENPVKYVEENLE NIVO01034609.1-59880 AGGTAGCCC Intron 3 CAGGcacagttaagtgacgatgggatg <2-----[59878:56605]-2> tatcatttcctaactaataaata gggttagtttgataaacgggtga SPP00000283_2.0 248 QK ETDRLIGSTNILHQADQTLRRIVS +K ETDRLI STNILHQADQTLRRIVS RK ETDRLICSTNILHQADQTLRRIVS NIVO01034609.1-56534 caGTAAGTC Intron 4 TAGgagacattaaacccggcaccaagt ga<0-----[56528:54024]-0>acagttgccattaacaactggttc aa aacatctatctttattgccaatct SPP00000283_2.0 274 QTMKEAK EQMFPYNLKLLAEELN QTMKEAK EQM+PYNLKLLAEELN QTMKEAK D:D[gat] EQMLPYNLKLLAEELN NIVO01034609.1-53951 caaaggaGGTATGCT Intron 5 TAGATgcacctatactgggca actaaca <1-----[53929:50197]-1> aattcaatattcaata gaggaca aggtaccggtgaaatc SPP00000283_2.0 298 KLKAEFLEDLRQGNKKYLCFQQTIDLADVISFFHYEKDNIVRKYFSKQH KLKAEFLEDLRQG+KKYLCFQQTIDL+DVISFFHYEKDNIVRKYFSKQH KLKAEFLEDLRQGDKKYLCFQQTIDLSDVISFFHYEKDNIVRKYFSKQH NIVO01034609.1-50146 acaggttggcacggaatcttccaagttggatttctgagaagaatttacc atacattaatgagaaaatgtaactatcattcttaaaaaattgaatcaaa acaagtgacaaaacaacgctaactcaatttttcttgatctaggttaggt // Making a N in phase 1 intron Making a R in phase 2 intron Making a D in phase 1 intron >NIVO01034609.1:subseq(2421749,113318).pep MKMGEDVRGAHSEGPQKLVLCVLCGLPAAGKSTFARALRHQLQQELGWAVGVVAYDDVMP EAVLEKASARPLPSQWKLLRQELLKYLEHFLLAVINGCQMSAPASRTEAMWKDFITCLKD QDLISSAAVEAQSLYPLTKTAVSRPLLLILDDNFYYQNSLGFCQLFLDCALETCLQRNAQ RPRPLPAETIHQMGSKIEKPNPEKNAWEHHSLAIQSPACASEARLKLTDLLITALENPVK YVEENLERKETDRLICSTNILHQADQTLRRIVSQTMKEAKDEQMLPYNLKLLAEELNKLK AEFLEDLRQGDKKYLCFQQTIDLSDVISFFHYEKDNIVRKYFSKQH // >NIVO01034609.1:subseq(2421749,113318).[63318:49998].sp ATGAAGATGGGGGAGGACGTCAGAGGAGCGCACAGCGAAGGGCCACAAAAGCTAGTCCTC TGTGTTCTCTGCGGCCTGCCCGCGGCAGGAAAGTCAACTTTCGCGCGCGCCCTCAGACAC CAGCTACAGCAGGAACTGGGCTGGGCGGTGGGCGTCGTCGCCTATGATGACGTCATGCCG GAAGCGGTCCTTGAGAAGGCAAGCGCACGCCCATTGCCATCCCAATGGAAATTGCTTCGC CAGGAACTGTTGAAGTACCTTGAACACTTCTTGCTGGCTGTCATTAATGGGTGTCAGATG TCTGCCCCAGCCAGCAGGACTGAAGCCATGTGGAAGGATTTTATAACCTGCTTGAAGGAT CAAGATCTGATATCTTCTGCAGCTGTTGAGGCCCAGTCTCTCTACCCCTTAACGAAGACT GCTGTGTCTAGACCTCTGCTTTTGATTTTAGATGACAACTTTTACTATCAAAATTCATTA GGCTTTTGCCAGCTCTTTTTAGATTGTGCTCTCGAGACCTGTCTACAGAGGAATGCCCAG AGACCACGACCACTGCCTGCCGAGACCATCCACCAGATGGGAAGCAAAATAGAAAAGCCC AACCCTGAGAAAAATGCTTGGGAACACCACAGCCTCGCAATTCAGAGTCCAGCATGTGCT TCAGAGGCCAGGCTGAAGCTGACTGATTTATTGATTACTGCTTTGGAAAATCCAGTAAAA TACGTGGAGGAGAATTTGGAACGAAAAGAAACAGACAGACTTATCTGTTCAACTAACATT CTTCATCAAGCTGATCAGACCCTCCGAAGAATTGTCTCTCAGACAATGAAGGAAGCCAAA GATGAACAGATGCTTCCATACAACTTGAAGCTTTTGGCAGAAGAACTTAACAAACTCAAA GCAGAGTTTTTGGAAGACCTAAGACAAGGAGACAAAAAATACCTGTGCTTTCAACAAACC ATTGACTTATCAGATGTTATTTCTTTTTTCCATTATGAGAAAGATAACATTGTAAGGAAG TATTTTTCAAAGCAGCAT // NIVO01034609.1:subseq(2421749,113318) GeneWise match 63318 50000 716.77 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 63318 63103 0.00 - 0 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise intron 63102 60786 0.00 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 60785 60530 0.00 - 0 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise intron 60529 60078 0.00 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 60077 59879 0.00 - 2 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise intron 59878 56605 0.00 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 56604 56529 0.00 - 1 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise intron 56528 54024 0.00 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 54023 53930 0.00 - 0 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise intron 53929 50197 0.00 - . NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 NIVO01034609.1:subseq(2421749,113318) GeneWise cds 50196 50000 0.00 - 2 NIVO01034609.1:subseq(2421749,113318)-genewise-prediction-1 //