------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 49511 - 49436 Found by: Infernal (score=26.7) Covels (score=20.31) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 1 Free Energy = -25.83 Type = 1 ..(((((((.......(((((((((((((((...............)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc (({(((((((--....([[(((-(((((((.................))))))).)))]])......-..)))))))})) target GAGGGGCAUC--UCCAUGAUGG-UGGGUCCCAAAGGCCCUGUGGGCAGGACCCAACCAGAACCUUCC-UUGGUGCCUGUC **** ^^^ ****