genewise output Score 331.34 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000009_1.0 1 MFQQFQASCLVLFFLVGFAQQTLKPQNRK M Q++ASCL L+FL GF Q + K MTVQLRASCLFLLFLAGFVQTNYSLE--K NIVO01038789.1:75122 aagctagttctcctcggtgcaatacg aGTAAGTG Intron 1 tctatgccgttttttcgttacaagta a<0-----[75203:78008] gtagagcttttctcatctgaatctag g SPP00000009_1.0 30 VDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGL +DC K V GTIY+Y A TLNG+E+IQFKQ+AGKHVLFVNVA Y GL MDCYKDVKGTIYDYDAFTLNGKEHIQFKQYAGKHVLFVNVATYCGL NIVO01038789.1:78006 CAGagttaggagaatgtggtacagagcactactggacgctgaggattgc -0>tagaaatagctaaaactctagaaatataaacgaattttatccaggt gtccatgaccctttctttttagactgcggtgcatcttctgcctttg SPP00000009_1.0 76 AAQYP LNALQEELKNFGVIVLAF AQYP LNALQEELK FG++VL F TAQYP E:E[gaa] LNALQEELKPFGLVVLGF NIVO01038789.1:78147 agctcGGTAAGAG Intron 2 TAGAAcagccggcactgtggtgt ccaac <1-----[78163:81082]-1> tactaaatactgttttgt atatt gtaagggggctcatggat SPP00000009_1.0 100 PCNQFGKQEPGTNSEILLGL YVC PCNQFGKQEPG NSEIL GL YV PCNQFGKQEPGENSEILPGL K:K[aag] YVR NIVO01038789.1:81139 ctactgacgcggatgaccgcAAGTAAGTG Intron 3 CAGGtgc cgaatgaaacgaacattcgt <2-----[81201:81681]-2> atg ctcacagaaaaacaactaag tct SPP00000009_1.0 124 PGSGFVPSFQLFEKGDVNGEKEQKVFTFLK PG G+VP+FQLFEKGDVNGE EQKVFTFLK PGGGYVPNFQLFEKGDVNGETEQKVFTFLK NIVO01038789.1:81692 cgggtgcatcctgagggaggagcagtatta cgggatcatattaagatagacaaattctta aaaacattcggtgagtgttaaggaccccag SPP00000009_1.0 154 NSCPPTSDLLGSSSQLFWEPMKVHDI SCP S+ +GS + WEP+ V DI QSCPHPSEFMGSIKHISWEPIMVRDI NIVO01038789.1:81782 GTGAGTT Intron 4 CAGcttccctgtagtaacattgcaagcga <0-----[81782:82896]-0>acgcaccattgctaatcgactttgat acttcttgtgcacatacgaccgctcc SPP00000009_1.0 180 RWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNT RWNFEKFLVGPDGVPVM WFH+ PVSTVKSDIL Y+KQF T RWNFEKFLVGPDGVPVMRWFHRTPVSTVKSDILAYMKQFQT NIVO01038789.1:82975 ctatgatcggcgggcgacttccacgaagatgacgtaactca ggataatttgcagtcttggtagcctgctacattcataatac cgttagcagattcctcgcgttgtactacgattgacgagcac // Making a E in phase 1 intron Making a K in phase 2 intron >NIVO01038789.1:subseq(406729,133097).pep MTVQLRASCLFLLFLAGFVQTNYSLEKMDCYKDVKGTIYDYDAFTLNGKEHIQFKQYAGK HVLFVNVATYCGLTAQYPELNALQEELKPFGLVVLGFPCNQFGKQEPGENSEILPGLKYV RPGGGYVPNFQLFEKGDVNGETEQKVFTFLKQSCPHPSEFMGSIKHISWEPIMVRDIRWN FEKFLVGPDGVPVMRWFHRTPVSTVKSDILAYMKQFQT // >NIVO01038789.1:subseq(406729,133097).[75122:83097].sp ATGACTGTACAGTTAAGGGCCTCTTGTCTTTTTCTCCTTTTCCTAGCTGGCTTTGTGCAA ACAAATTACAGTCTAGAGAAGATGGATTGCTACAAAGATGTGAAAGGCACCATCTATGAT TATGACGCTTTTACTCTTAATGGAAAGGAACACATTCAGTTCAAGCAGTATGCGGGCAAA CATGTCCTTTTTGTCAATGTGGCCACCTATTGTGGTCTGACAGCTCAATATCCTGAACTG AATGCACTACAGGAGGAGCTGAAGCCCTTTGGCTTAGTTGTGTTGGGATTTCCCTGTAAC CAATTCGGAAAGCAAGAACCAGGAGAAAACTCAGAAATCCTTCCAGGACTGAAGTATGTC CGTCCAGGAGGAGGATACGTACCTAATTTCCAGCTGTTTGAGAAAGGGGATGTGAATGGT GAAACAGAGCAGAAAGTCTTCACCTTCTTAAAGCAATCCTGTCCTCACCCTTCTGAGTTT ATGGGCTCAATCAAACATATATCCTGGGAACCCATCATGGTCCGTGACATCCGCTGGAAT TTTGAAAAGTTCCTAGTGGGACCTGATGGCGTCCCTGTCATGCGCTGGTTTCATCGGACT CCAGTCAGTACAGTCAAGTCAGATATTCTGGCATACATGAAACAGTTCCAAACC // NIVO01038789.1:subseq(406729,133097) GeneWise match 75122 83097 332.34 + . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 75122 75202 0.00 + 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 75203 78008 0.00 + . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 78009 78162 0.00 + 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 78163 81082 0.00 + . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 81083 81200 0.00 + 2 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 81201 81681 0.00 + . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 81682 81781 0.00 + 1 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 81782 82896 0.00 + . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 82897 83097 0.00 + 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 // genewise output Score 382.24 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000009_1.0 1 MFQQFQASCLVLFFLVGFAQQTLKPQNRK M+ Q+ ASCL +FLV +AQ T K Q K MILQLWASCLFPLFLVSLAQLTPKQQQMK NIVO01038789.1-56726 aaccctgttctcctcgatgccacacccaaGTAAGTG Intron 1 tttatgccgttcttttgtcatccaaaata<0-----[56639:54310] gcggcgccttcagcgccatggtgggaggg SPP00000009_1.0 30 VDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGL VDC KGVTGTIYEYGALTLNGEEYIQFKQ+AGKHVLFVNVA YXGL VDCYKGVTGTIYEYGALTLNGEEYIQFKQYAGKHVLFVNVATYXGL NIVO01038789.1-54312 CAGggttaggagaatgtggcacagggtactactggacgctgaggattgt -0>tagaagtcgctaaagctctagaaatataaacgaattttatccaggt gtctgggaccctgtaccccttggtcgcggtacgtcgtctgcctacg SPP00000009_1.0 76 AAQYP LNALQEELKNFGVIVLAF AQYP LNALQEELK FGV+VL F TAQYP E:E[gaa] LNALQEELKPFGVVVLGF NIVO01038789.1-54171 agctcGGTAAGAA Intron 2 CAGAAcagccggcactggggtgt ccaac <1-----[54155:52326]-1> tactaaatactgttttgt atgta gtaagggggtctatggct SPP00000009_1.0 100 PCNQFGKQEPGTNSEILLGL YVC PCNQFGKQEP NSEIL+GL YV PCNQFGKQEPAKNSEILMGL K:K[aag] YVR NIVO01038789.1-52269 ctactgacgcgaatgacagcAAGTAAGTG Intron 3 CAGGtgc cgaatgaaaccaacatttgt <2-----[52207:51052]-2> atg cccataaagaagcagctggc tat SPP00000009_1.0 124 PGSGFVPSFQLFEKGDVNGEKEQKVFTFLK PG GFVP+FQLFEKGDVNGEKEQKVFTFLK PGGGFVPNFQLFEKGDVNGEKEQKVFTFLK NIVO01038789.1-51041 cgggtgcatcctgagggaggagcagtatca cgggttcatattaagatagaaaaattctta attcttcttgctgagtgtaaaaggctccgg SPP00000009_1.0 154 NSCPPTSDLLGSSSQLFWEPMKVHDI NSCPPTSDLLGSSSQLFWEPMKVHDI NSCPPTSDLLGSSSQLFWEPMKVHDI NIVO01038789.1-50951 GTAAGTA Intron 4 CAGattccatgctgttaccttgcaagcga <0-----[50951:50201]-0>acgccccattgccgattgactataat ccctactttgcaatgccggcggctct SPP00000009_1.0 180 RWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNT RWNFEKFLVGPDGVPVM W+H+A VSTVKSD+LEYLKQF + RWNFEKFLVGPDGVPVMRWYHRASVSTVKSDMLEYLKQFKS NIVO01038789.1-50122 ctatgatcggcgggcgacttccgtgaagatgacgtcactaa ggataatttgcagtcttggaagcctgctacattaataatag cgctggtaggtttctcgtgccgtaccataacgggcgggcac // Making a E in phase 1 intron Making a K in phase 2 intron >NIVO01038789.1:subseq(406729,133097).pep MILQLWASCLFPLFLVSLAQLTPKQQQMKVDCYKGVTGTIYEYGALTLNGEEYIQFKQYA GKHVLFVNVATYXGLTAQYPELNALQEELKPFGVVVLGFPCNQFGKQEPAKNSEILMGLK YVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR WNFEKFLVGPDGVPVMRWYHRASVSTVKSDMLEYLKQFKS // >NIVO01038789.1:subseq(406729,133097).[56726:49998].sp ATGATCCTGCAGCTCTGGGCCTCCTGTCTTTTCCCACTGTTCCTGGTCAGCTTAGCTCAG CTGACTCCGAAGCAGCAACAGATGAAGGTGGATTGCTATAAGGGGGTGACAGGCACCATC TATGAGTATGGAGCCCTCACCCTCAATGGTGAGGAGTATATCCAGTTCAAGCAGTATGCA GGCAAGCATGTCCTGTTTGTCAATGTGGCCACCTATTGAGGCTTGACAGCTCAGTATCCA GAACTGAATGCACTACAGGAGGAGCTGAAGCCTTTCGGTGTAGTTGTGTTGGGCTTTCCC TGCAACCAATTTGGAAAACAAGAGCCAGCAAAGAACTCAGAGATCCTTATGGGGCTCAAG TATGTACGTCCAGGTGGTGGCTTTGTTCCCAATTTTCAGCTCTTTGAGAAAGGGGATGTG AATGGAGAAAAAGAACAGAAGGTCTTTACCTTCCTGAAGAACTCCTGCCCTCCAACCTCT GATCTTTTGGGCTCATCAAGTCAGCTCTTCTGGGAGCCCATGAAGGTCCATGACATTCGC TGGAACTTTGAGAAGTTTCTAGTGGGGCCTGATGGTGTCCCTGTCATGCGTTGGTACCAC CGGGCTTCAGTCAGCACAGTTAAATCAGACATGCTGGAGTACCTGAAGCAGTTCAAAAGC // NIVO01038789.1:subseq(406729,133097) GeneWise match 56726 50000 382.24 - . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 56726 56640 0.00 - 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 56639 54310 0.00 - . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 54309 54156 0.00 - 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 54155 52326 0.00 - . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 52325 52208 0.00 - 2 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 52207 51052 0.00 - . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 51051 50952 0.00 - 1 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise intron 50951 50201 0.00 - . NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 NIVO01038789.1:subseq(406729,133097) GeneWise cds 50200 50000 0.00 - 0 NIVO01038789.1:subseq(406729,133097)-genewise-prediction-1 //