genewise output Score 370.23 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000008_1.0 1 MTTQLRVVHLLPLLLACFVQTSPKQEKMK MT QLR L L LA FVQT+ E K MTVQLRASCLFLLFLAGFVQTNYSLE--K NIVO01038789.1:75125 aagctagttctcctcggtgcaatacg aGTAAGTG Intron 1 tctatgccgttttttcgttacaagta a<0-----[75206:78011] gtagagcttttctcatctgaatctag g SPP00000008_1.0 30 MDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGL MDC+KD KGTIYDY+A+ LN E++ FKQY GKH+LFVNVATYCGL MDCYKDVKGTIYDYDAFTLNGKEHIQFKQYAGKHVLFVNVATYCGL NIVO01038789.1:78009 CAGagttaggagaatgtggtacagagcactactggacgctgaggattgc -0>tagaaatagctaaaactctagaaatataaacgaattttatccaggt gtccatgaccctttctttttagactgcggtgcatcttctgcctttg SPP00000008_1.0 76 TAQYP LNALQEELKPYGLVVLGF TAQYP LNALQEELKP+GLVVLGF TAQYP E:E[gaa] LNALQEELKPFGLVVLGF NIVO01038789.1:78150 agctcGGTAAGAG Intron 2 TAGAAcagccggcactgtggtgt ccaac <1-----[78166:81085]-1> tactaaatactgttttgt atatt gtaagggggctcatggat SPP00000008_1.0 100 PCNQFGKQEPGDNKEILPGL YVR PCNQFGKQEPG+N EILPGL YVR PCNQFGKQEPGENSEILPGL K:K[aag] YVR NIVO01038789.1:81142 ctactgacgcggatgaccgcAAGTAAGTG Intron 3 CAGGtgc cgaatgaaacgaacattcgt <2-----[81204:81684]-2> atg ctcacagaaaaacaactaag tct SPP00000008_1.0 124 PGGGFVPSFQLFEKGDVNGEKEQKVFSFLK PGGG+VP+FQLFEKGDVNGE EQKVF+FLK PGGGYVPNFQLFEKGDVNGETEQKVFTFLK NIVO01038789.1:81695 cgggtgcatcctgagggaggagcagtatta cgggatcatattaagatagacaaattctta aaaacattcggtgagtgttaaggaccccag SPP00000008_1.0 154 HSCPHPSEILGTFKSISWDPVKVHDI SCPHPSE++G++K ISW+P+ V DI QSCPHPSEFMGSIKHISWEPIMVRDI NIVO01038789.1:81785 GTGAGTT Intron 4 CAGcttccctgtagtaacattgcaagcga <0-----[81785:82899]-0>acgcaccattgctaatcgactttgat acttcttgtgcacatacgaccgctcc SPP00000008_1.0 180 RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK RWNFEKFLVGPDG+PVMRW HR VS+VK+DILAY+KQF+TK RWNFEKFLVGPDGVPVMRWFHRTPVSTVKSDILAYMKQFQTK NIVO01038789.1:82978 ctatgatcggcgggcgacttccacgaagatgacgtaactcaa ggataatttgcagtcttggtagcctgctacattcataataca cgttagcagattcctcgcgttgtactacgattgacgagcaca // Making a E in phase 1 intron Making a K in phase 2 intron >NIVO01038789.1:subseq(406726,133103).pep MTVQLRASCLFLLFLAGFVQTNYSLEKMDCYKDVKGTIYDYDAFTLNGKEHIQFKQYAGK HVLFVNVATYCGLTAQYPELNALQEELKPFGLVVLGFPCNQFGKQEPGENSEILPGLKYV RPGGGYVPNFQLFEKGDVNGETEQKVFTFLKQSCPHPSEFMGSIKHISWEPIMVRDIRWN FEKFLVGPDGVPVMRWFHRTPVSTVKSDILAYMKQFQTK // >NIVO01038789.1:subseq(406726,133103).[75125:83103].sp ATGACTGTACAGTTAAGGGCCTCTTGTCTTTTTCTCCTTTTCCTAGCTGGCTTTGTGCAA ACAAATTACAGTCTAGAGAAGATGGATTGCTACAAAGATGTGAAAGGCACCATCTATGAT TATGACGCTTTTACTCTTAATGGAAAGGAACACATTCAGTTCAAGCAGTATGCGGGCAAA CATGTCCTTTTTGTCAATGTGGCCACCTATTGTGGTCTGACAGCTCAATATCCTGAACTG AATGCACTACAGGAGGAGCTGAAGCCCTTTGGCTTAGTTGTGTTGGGATTTCCCTGTAAC CAATTCGGAAAGCAAGAACCAGGAGAAAACTCAGAAATCCTTCCAGGACTGAAGTATGTC CGTCCAGGAGGAGGATACGTACCTAATTTCCAGCTGTTTGAGAAAGGGGATGTGAATGGT GAAACAGAGCAGAAAGTCTTCACCTTCTTAAAGCAATCCTGTCCTCACCCTTCTGAGTTT ATGGGCTCAATCAAACATATATCCTGGGAACCCATCATGGTCCGTGACATCCGCTGGAAT TTTGAAAAGTTCCTAGTGGGACCTGATGGCGTCCCTGTCATGCGCTGGTTTCATCGGACT CCAGTCAGTACAGTCAAGTCAGATATTCTGGCATACATGAAACAGTTCCAAACCAAA // NIVO01038789.1:subseq(406726,133103) GeneWise match 75125 83103 371.23 + . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 75125 75205 0.00 + 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 75206 78011 0.00 + . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 78012 78165 0.00 + 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 78166 81085 0.00 + . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 81086 81203 0.00 + 2 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 81204 81684 0.00 + . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 81685 81784 0.00 + 1 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 81785 82899 0.00 + . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 82900 83103 0.00 + 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 // genewise output Score 335.68 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000008_1.0 1 MTTQLRVVHLLPLLLACFVQTSPKQEKMK M QL L PL L + Q +PKQ++MK MILQLWASCLFPLFLVSLAQLTPKQQQMK NIVO01038789.1-56729 aaccctgttctcctcgatgccacacccaaGTAAGTG Intron 1 tttatgccgttcttttgtcatccaaaata<0-----[56642:54313] gcggcgccttcagcgccatggtgggaggg SPP00000008_1.0 30 MDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGL +DC+K GTIY+Y A+ LN EY+ FKQY GKH+LFVNVATY GL VDCYKGVTGTIYEYGALTLNGEEYIQFKQYAGKHVLFVNVATYXGL NIVO01038789.1-54315 CAGggttaggagaatgtggcacagggtactactggacgctgaggattgt -0>tagaagtcgctaaagctctagaaatataaacgaattttatccaggt gtctgggaccctgtaccccttggtcgcggtacgtcgtctgcctacg SPP00000008_1.0 76 TAQYP LNALQEELKPYGLVVLGF TAQYP LNALQEELKP+G+VVLGF TAQYP E:E[gaa] LNALQEELKPFGVVVLGF NIVO01038789.1-54174 agctcGGTAAGAA Intron 2 CAGAAcagccggcactggggtgt ccaac <1-----[54158:52329]-1> tactaaatactgttttgt atgta gtaagggggtctatggct SPP00000008_1.0 100 PCNQFGKQEPGDNKEILPGL YVR PCNQFGKQEP N EIL GL YVR PCNQFGKQEPAKNSEILMGL K:K[aag] YVR NIVO01038789.1-52272 ctactgacgcgaatgacagcAAGTAAGTG Intron 3 CAGGtgc cgaatgaaaccaacatttgt <2-----[52210:51055]-2> atg cccataaagaagcagctggc tat SPP00000008_1.0 124 PGGGFVPSFQLFEKGDVNGEKEQKVFSFLK PGGGFVP+FQLFEKGDVNGEKEQKVF+FLK PGGGFVPNFQLFEKGDVNGEKEQKVFTFLK NIVO01038789.1-51044 cgggtgcatcctgagggaggagcagtatca cgggttcatattaagatagaaaaattctta attcttcttgctgagtgtaaaaggctccgg SPP00000008_1.0 154 HSCPHPSEILGTFKSISWDPVKVHDI +SCP S++LG+ + W+P+KVHDI NSCPPTSDLLGSSSQLFWEPMKVHDI NIVO01038789.1-50954 GTAAGTA Intron 4 CAGattccatgctgttaccttgcaagcga <0-----[50954:50204]-0>acgccccattgccgattgactataat ccctactttgcaatgccggcggctct SPP00000008_1.0 180 RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK RWNFEKFLVGPDG+PVMRW HRA+VS+VK+D+L YLKQFK++ RWNFEKFLVGPDGVPVMRWYHRASVSTVKSDMLEYLKQFKSE NIVO01038789.1-50125 ctatgatcggcgggcgacttccgtgaagatgacgtcactaag ggataatttgcagtcttggaagcctgctacattaataataga cgctggtaggtttctcgtgccgtaccataacgggcgggcaca // Making a E in phase 1 intron Making a K in phase 2 intron >NIVO01038789.1:subseq(406726,133103).pep MILQLWASCLFPLFLVSLAQLTPKQQQMKVDCYKGVTGTIYEYGALTLNGEEYIQFKQYA GKHVLFVNVATYXGLTAQYPELNALQEELKPFGVVVLGFPCNQFGKQEPAKNSEILMGLK YVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR WNFEKFLVGPDGVPVMRWYHRASVSTVKSDMLEYLKQFKSE // >NIVO01038789.1:subseq(406726,133103).[56729:49998].sp ATGATCCTGCAGCTCTGGGCCTCCTGTCTTTTCCCACTGTTCCTGGTCAGCTTAGCTCAG CTGACTCCGAAGCAGCAACAGATGAAGGTGGATTGCTATAAGGGGGTGACAGGCACCATC TATGAGTATGGAGCCCTCACCCTCAATGGTGAGGAGTATATCCAGTTCAAGCAGTATGCA GGCAAGCATGTCCTGTTTGTCAATGTGGCCACCTATTGAGGCTTGACAGCTCAGTATCCA GAACTGAATGCACTACAGGAGGAGCTGAAGCCTTTCGGTGTAGTTGTGTTGGGCTTTCCC TGCAACCAATTTGGAAAACAAGAGCCAGCAAAGAACTCAGAGATCCTTATGGGGCTCAAG TATGTACGTCCAGGTGGTGGCTTTGTTCCCAATTTTCAGCTCTTTGAGAAAGGGGATGTG AATGGAGAAAAAGAACAGAAGGTCTTTACCTTCCTGAAGAACTCCTGCCCTCCAACCTCT GATCTTTTGGGCTCATCAAGTCAGCTCTTCTGGGAGCCCATGAAGGTCCATGACATTCGC TGGAACTTTGAGAAGTTTCTAGTGGGGCCTGATGGTGTCCCTGTCATGCGTTGGTACCAC CGGGCTTCAGTCAGCACAGTTAAATCAGACATGCTGGAGTACCTGAAGCAGTTCAAAAGC GAA // NIVO01038789.1:subseq(406726,133103) GeneWise match 56729 50000 335.68 - . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 56729 56643 0.00 - 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 56642 54313 0.00 - . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 54312 54159 0.00 - 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 54158 52329 0.00 - . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 52328 52211 0.00 - 2 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 52210 51055 0.00 - . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 51054 50955 0.00 - 1 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise intron 50954 50204 0.00 - . NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 NIVO01038789.1:subseq(406726,133103) GeneWise cds 50203 50000 0.00 - 0 NIVO01038789.1:subseq(406726,133103)-genewise-prediction-1 //