genewise output Score 19.47 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000006_1.0 155 SCPPTSELLGTSDRLFWEPMKVH SCPP+S LL + + W+ +H SCPPSSLLLFGWETIAWKNNDLH NIVO01038251.1:63104 ttccttctttgtgaagtaaagcc cgccccttttggactcgaaaata cctactgagtcggttcggttttt // >NIVO01038251.1:subseq(1111464,102664).pep SCPPSSLLLFGWETIAWKNNDLH // >NIVO01038251.1:subseq(1111464,102664).[63104:63172].sp TCCTGCCCTCCATCCTCTCTGTTATTGTTTGGCTGGGAGACTATTGCCTGGAAGAATAAT GATCTTCAT // NIVO01038251.1:subseq(1111464,102664) GeneWise match 63104 63172 19.47 + . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 63104 63172 0.00 + 0 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 // genewise output Score 424.94 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000006_1.0 1 MARLLQASCLLSLLLAGFVSQSRGQEKSK MARLL+ASCLLSLLLAGF+ S+GQEKSK MARLLRASCLLSLLLAGFIPPSQGQEKSK NIVO01038251.1-57255 agccccgttcctcccggtaccacgcgataGTGAGTG Intron 1 tcgttgccgttctttcgttccgagaaaca<0-----[57168:52662] gcgccgacctccgcgccctcgcgaggggg SPP00000006_1.0 30 MDCHGGISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYXGL DCH G+ GTIYEYGALTIDGEEYIPFK+YAGKY+LFVNVASYXGL TDCHAGVGGTIYEYGALTIDGEEYIPFKRYAGKYILFVNVASYXGL NIVO01038251.1-52664 CAGagtcgggggaatgtggcaaggggtactactggatactgaggattgc -0>cagacgtggctaaagctctagaaatctagacgaattttatcgaggt gcctttgcccctgcgcccctgggctctggttcaccccccgcccacg SPP00000006_1.0 76 TGQYI LNALQEELAPFGLVILGF TGQY+ LNALQEEL PFGLVILGF TGQYV E:E[gaa] LNALQEELEPFGLVILGF NIVO01038251.1-52523 agctgGGTAAGAG Intron 2 CAGAAcagccggcgctgcgacgt cgaat <1-----[52507:51299]-1> tactaaatactgttttgt gcgtt gtaggagtaactgctgcc SPP00000006_1.0 100 PCNQFGKQEPGENSEILPTL YVR PCNQFGKQEPGENSEIL TL YVR PCNQFGKQEPGENSEILATL K:K[aag] YVR NIVO01038251.1-51242 ctactgacgcggatgacgacAAGTGAGTG Intron 3 TAGGtgc cgaatgaaacgaacattcct <2-----[51180:50741]-2> atg cccataaaaaagcggcaccc tta SPP00000006_1.0 124 PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK PGGGF PNFQLFEKGDVNGEKEQKFYTFLK PGGGFTPNFQLFEKGDVNGEKEQKFYTFLK NIVO01038251.1-50730 cgggtacatcctgagggaggagcattatca cgggtccatattaagatagaaaaatactta gtgccccccggtgactgcggagggccacgg SPP00000006_1.0 154 NSCPPTSELLGTSDRLFWEPMKVHDI NSCPPTSELLG+ RLFWEPMKVHDI NSCPPTSELLGSPGRLFWEPMKVHDI NIVO01038251.1-50640 GTGAGTA Intron 4 CAGattccatgccgtcgccttgcaagcga <0-----[50640:50219]-0>acgccccattgccggttgactataat cctttcggcacaccctcgacggctcc SPP00000006_1.0 180 RWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK RWNFEKFLVGPDGIPIMRW+HRTTV++VKMDIL+YMRR+A L K K RWNFEKFLVGPDGIPIMRWYHRTTVNSVKMDILTYMRRRAVLEAKGK NIVO01038251.1-50140 ctatgatcggcggacaacttccaagatgaagacatacccggcggaga ggataatttgcagtcttggaagcctactatattcatgggcttacaga ggctggcgggacccccgcgccccgcctcggtcgccggggacggcggg // Making a E in phase 1 intron Making a K in phase 2 intron >NIVO01038251.1:subseq(1111464,102664).pep MARLLRASCLLSLLLAGFIPPSQGQEKSKTDCHAGVGGTIYEYGALTIDGEEYIPFKRYA GKYILFVNVASYXGLTGQYVELNALQEELEPFGLVILGFPCNQFGKQEPGENSEILATLK YVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGSPGRLFWEPMKVHDIR WNFEKFLVGPDGIPIMRWYHRTTVNSVKMDILTYMRRRAVLEAKGK // >NIVO01038251.1:subseq(1111464,102664).[57255:49998].sp ATGGCCCGGCTCCTCCGGGCATCCTGCCTTCTCTCCCTGCTCCTGGCCGGCTTCATTCCC CCGAGCCAGGGACAGGAGAAGTCGAAGACGGACTGCCATGCTGGTGTGGGCGGCACCATC TATGAGTACGGGGCCCTCACCATCGATGGGGAGGAGTACATTCCCTTTAAGCGGTATGCT GGCAAATACATCCTCTTCGTCAACGTGGCCAGCTACTGAGGCCTGACGGGCCAGTATGTT GAACTGAATGCACTGCAGGAAGAGCTTGAACCATTCGGTCTGGTCATTCTGGGCTTCCCC TGCAACCAATTTGGAAAACAAGAACCAGGAGAGAACTCGGAGATCCTAGCCACCCTCAAG TATGTTCGACCGGGTGGGGGCTTCACCCCCAACTTCCAGCTGTTTGAGAAAGGCGATGTG AACGGGGAGAAAGAGCAGAAGTTCTACACATTCCTGAAGAACTCCTGTCCTCCTACCTCG GAGCTCCTAGGCTCACCCGGCCGCCTTTTCTGGGAACCCATGAAGGTCCATGACATCCGG TGGAACTTTGAGAAGTTCCTGGTGGGGCCAGACGGCATCCCCATCATGCGCTGGTACCAC CGCACCACGGTCAACTCTGTCAAGATGGATATCCTGACCTACATGCGGCGGCGGGCAGTC CTGGAGGCCAAGGGGAAG // NIVO01038251.1:subseq(1111464,102664) GeneWise match 57255 50000 424.94 - . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 57255 57169 0.00 - 0 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise intron 57168 52662 0.00 - . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 52661 52508 0.00 - 0 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise intron 52507 51299 0.00 - . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 51298 51181 0.00 - 2 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise intron 51180 50741 0.00 - . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 50740 50641 0.00 - 1 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise intron 50640 50219 0.00 - . NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 NIVO01038251.1:subseq(1111464,102664) GeneWise cds 50218 50000 0.00 - 0 NIVO01038251.1:subseq(1111464,102664)-genewise-prediction-1 //