genewise output
Score 22.66 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000005_1.0  149 DVAWNFEKF                                         
                     D AWNFEKF                                         
                     DPAWNFEKF                                         
NIVO01055543.1399559 gcgtatgat                                         
                     accgataat                                         
                     caagccgac                                         


//
>NIVO01055543.1.pep
DPAWNFEKF
//
>NIVO01055543.1.[399559:399585].sp
GACCCAGCATGGAACTTCGAGAAATTC
//
NIVO01055543.1	GeneWise	match	399559	399585	22.66	+	.	NIVO01055543.1-genewise-prediction-1
NIVO01055543.1	GeneWise	cds	399559	399585	0.00	+	0	NIVO01055543.1-genewise-prediction-1
//

genewise output
Score 430.73 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000005_1.0    1 MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLXGTTTRDFTQ 
                     MA+IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLXGTTTRDFTQ 
                     MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLXGTTTRDFTQ 
NIVO01055543.1-22496 agtagatttgcagaacgggaggtaatcgaggcagaggtctgaaacgtac 
                     tcatcactaatgctgtagaatatactgggctttaatcctggcccgatca 
                     gtctcgcccccttccgtgggatctacacgaggtgtgcgtacaccgccca 


SPP00000005_1.0   50 LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
                     LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
                     LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
NIVO01055543.1-22349 cagcctctcaccggcgtctactgccGTGAGAG  Intron 1   CAGg 
                     taataggtcggttttgtcgaatgaa<0-----[22274:19796]-0>a 
                     ccggaccccgcggttcctctatatg                       g 


SPP00000005_1.0   76 NCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 
                     NCQNEEILNSLKYVRPGGG+QPTFTLVQKC+VNGQNEHPVFAYLKDKLP 
                     NCQNEEILNSLKYVRPGGGFQPTFTLVQKCDVNGQNEHPVFAYLKDKLP 
NIVO01055543.1-19792 atcaggataacatgccgggtccatacgcatggagcagccgtgtcagacc 
                     agaaaattagtaatgcgggtacctcttaagatagaaaacttcataaatc 
                     ctatagcgtccgtcctgtacgcccctcggttgttgtgttccccggtgcc 


SPP00000005_1.0  125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTF 
                     YPYDDPFSLMTDPK IIWSPVRRSDV+WNFEKFLIGPEGEPFRRYSRTF 
                     YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTF 
NIVO01055543.1-19645 tctggcttcaagcataatacgcctggttatgatcagcgggctcctacat 
                     acaaactcttcacatttggctggcatcgataatttgcagactggaggct 
                     cttccgtccgctcgcctgccgccgtgcgctggcctggaggccccccccc 


SPP00000005_1.0  174 PTINIEPDIKRLLKVAI                                 
                      TINIEPDIKRLLKVAI                                 
                     QTINIEPDIKRLLKVAI                                 
NIVO01055543.1-19498 caaaagcgaacccagga                                 
                     actatacatagttatct                                 
                     actccgtccgcccatca                                 


//
>NIVO01055543.1.pep
MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLXGTTTRDFTQLNELQCRFPRR
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLVQKCDVNGQNEHPVFAYLK
DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFQTINIEP
DIKRLLKVAI
//
>NIVO01055543.1.[22496:19446].sp
ATGGCTTACATTGCCAAGTCCTTCTACGACCTCAGTGCTATCAGCCTGGATGGGGAGAAG
GTAGATTTCAATACATTCCGAGGCAGGGCAGTGCTGATTGAGAATGTGGCCTCGCTTTGA
GGCACAACCACCCGGGACTTCACCCAACTCAACGAGCTGCAATGCCGCTTCCCCAGGCGC
CTGGTGGTTCTTGGCTTCCCTTGCAATCAATTTGGACATCAGGAGAACTGTCAAAATGAA
GAGATCTTGAATAGCCTCAAGTATGTCCGCCCTGGGGGTGGATTCCAGCCCACCTTCACC
CTTGTCCAGAAGTGTGATGTGAATGGTCAGAATGAGCATCCTGTCTTCGCCTACCTGAAG
GATAAGCTCCCCTACCCTTATGACGACCCGTTTTCCCTCATGACCGATCCCAAGTTCATC
ATTTGGAGCCCCGTGCGCCGCTCGGATGTGTCCTGGAACTTTGAGAAGTTCCTCATTGGG
CCGGAAGGGGAGCCCTTCCGCCGCTACAGCCGCACCTTCCAAACCATTAACATCGAGCCT
GACATCAAGCGCCTCCTCAAAGTTGCCATA
//
NIVO01055543.1	GeneWise	match	22496	19448	430.73	-	.	NIVO01055543.1-genewise-prediction-1
NIVO01055543.1	GeneWise	cds	22496	22275	0.00	-	0	NIVO01055543.1-genewise-prediction-1
NIVO01055543.1	GeneWise	intron	22274	19796	0.00	-	.	NIVO01055543.1-genewise-prediction-1
NIVO01055543.1	GeneWise	cds	19795	19448	0.00	-	0	NIVO01055543.1-genewise-prediction-1
//