genewise output
Score 394.61 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0    1 MCAARLAA---AAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVA 
                     MCAA+ +A   AAAA ++VYAFSARPLAGGEP  L SLRGKVLLIENVA 
                     MCAAQRSAAALAAAAPRTVYAFSARPLAGGEPFHLASLRGKVLLIENVA 
NIVO01040474.1:49952 atggcctgggcggggccagtgttgcccggggctccgtccgagccagagg 
                     tgccagcccctcccccgctactccgctcggactatcctggattttaatc 
                     gcctgcggccggggcgcggccccgttgccggcccgccggcgggctgcag 


SPP00000004_1.0   47 SLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ            
                     SLXGTTVRDYTQMN+LQRRLGPRGLVVLGFPCNQFGHQ            
                     SLXGTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQFGHQ            
NIVO01040474.1:50099 tctgaagcgtacaagcccccgccgcggcgtctactgcc            
                     ctggcctgaacataataggtgcggttttgtcgaatgaa            
                     gcacagggcccggtcgggccacgcgcacccgccgtgtg            


SPP00000004_1.0   85                        ENAKNEEILNSLKYVRPGGGFEPNFM 
                                            ENAKNEEILN LKYVRPGGGFEPNFM 
                                            ENAKNEEILNCLKYVRPGGGFEPNFM 
NIVO01040474.1:50213 GTGCGCC  Intron 1   CAGgagaaggacatcatgccgggtgcata 
                     <0-----[50213:50473]-0>aacaaaattagtaatgcgggtacatt 
                                            accgcggcgtcggccagctgcgctcg 


SPP00000004_1.0  111 LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRND 
                     LFEKCEVNG  AHPLFAFLRE LP PSDDATALMTDPK ITWSPVCRND 
                     LFEKCEVNGEKAHPLFAFLRETLPTPSDDATALMTDPKFITWSPVCRND 
NIVO01040474.1:50552 ctgatggaggagccctgtccgaccacagggagcaagcataattcgtcag 
                     ttaagatagaacacttcttgactcccgaacccttcacattcgcctggaa 
                     ccagcggtcgggtgcccctggtgcgatcccttcgcctgccggcggcccc 


SPP00000004_1.0  160 VAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGPS        
                     V+WNFEKFLVGPDGVP+RRYSRRF TIDIEPDIE LLSQG S        
                     VSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLSQGAS        
NIVO01040474.1:50699 gttatgatcggcgggcgcatacctcaagagcgagacctcggt        
                     tcgataatttgcagtctggagggttctatacatacttcagcc        
                     ccgccggcggcactgcgcgcccctgccccgtctacggcggct        


//
>NIVO01040474.1:subseq(1782700,100824).pep
MCAAQRSAAALAAAAPRTVYAFSARPLAGGEPFHLASLRGKVLLIENVASLXGTTVRDYT
QMNDLQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEV
NGEKAHPLFAFLRETLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVR
RYSRRFLTIDIEPDIETLLSQGAS
//
>NIVO01040474.1:subseq(1782700,100824).[49952:50824].sp
ATGTGCGCCGCTCAGCGCTCGGCGGCCGCCCTGGCGGCGGCGGCCCCGCGCACGGTGTAC
GCCTTCTCCGCGCGTCCTCTGGCCGGCGGGGAGCCCTTCCACCTGGCCTCCCTGCGGGGC
AAGGTGCTGCTCATTGAGAACGTAGCGTCGCTCTGAGGCACAACGGTGCGGGACTACACC
CAGATGAATGACCTGCAGCGGCGCCTCGGACCCCGGGGCCTGGTCGTACTCGGCTTCCCG
TGCAACCAGTTTGGGCATCAGGAAAACGCCAAGAACGAGGAGATCCTGAATTGCCTGAAG
TACGTCCGACCGGGCGGTGGGTTCGAGCCCAATTTCATGCTCTTCGAAAAGTGCGAGGTG
AATGGCGAGAAGGCGCATCCGCTCTTCGCCTTCCTTCGGGAGACTCTGCCCACGCCAAGT
GACGACGCCACTGCTCTCATGACCGACCCTAAGTTCATCACGTGGTCCCCGGTGTGCCGC
AACGACGTCTCCTGGAACTTCGAGAAGTTCCTGGTGGGCCCAGACGGTGTGCCCGTGCGC
AGGTACAGCCGCCGCTTTCTGACCATCGACATCGAGCCTGACATTGAAACCCTGCTGTCC
CAGGGGGCCTCT
//
NIVO01040474.1:subseq(1782700,100824)	GeneWise	match	49952	50824	396.61	+	.	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
NIVO01040474.1:subseq(1782700,100824)	GeneWise	cds	49952	50212	0.00	+	0	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
NIVO01040474.1:subseq(1782700,100824)	GeneWise	intron	50213	50473	0.00	+	.	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
NIVO01040474.1:subseq(1782700,100824)	GeneWise	cds	50474	50824	0.00	+	0	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
//

genewise output
Score 18.34 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0  132 ALPAPSDDATALMTDPKLITWSPVC                         
                     A+P       AL+ D   +TWS  C                         
                     AIPKEQKQILALLRDHGQVTWSYSC                         
NIVO01040474.1-89137 gacagcacacgcccgcgcgattttt                         
                     ctcaaaaattcttgaagatcgcacg                         
                     gcaaggggcgtgttctgactgctac                         


//
>NIVO01040474.1:subseq(1782700,100824).pep
AIPKEQKQILALLRDHGQVTWSYSC
//
>NIVO01040474.1:subseq(1782700,100824).[89137:89061].sp
GCGATCCCAAAAGAGCAGAAGCAGATCCTGGCTCTGCTTCGTGACCATGGGCAAGTCACT
TGGTCCTATTCATGC
//
NIVO01040474.1:subseq(1782700,100824)	GeneWise	match	89137	89063	18.34	-	.	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
NIVO01040474.1:subseq(1782700,100824)	GeneWise	cds	89137	89063	0.00	-	0	NIVO01040474.1:subseq(1782700,100824)-genewise-prediction-1
//