genewise output
Score 649.89 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000003_1.0    1 MLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKHFLGRR 
                     MLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKH+LGRR 
                     MLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKHLLGRR 
NIVO01034600.1:49964 acctcccctcactgcagttcgctcctcgagtactccgtctacactcgcc 
                     ttgctttactgtgcacccgttttcgttgcctttgttattgtgaattggg 
                     ggccggtccggcccggcgccgccgccgcgccgcggaccgcccgcagcta 


SPP00000003_1.0   50 RRGQPEPEVELNSEGEEVPPDDPPICVSDDNRLCTLASLKAVWHGQKLD 
                     RRGQPE EVELNS+GEEVPPDDPP+CVSDDNRLCTLASL+AVWHGQKLD 
                     RRGQPEIEVELNSDGEEVPPDDPPVCVSDDNRLCTLASLRAVWHGQKLD 
NIVO01034600.1:50111 ccgccgagggcaagggggccggccgtgtggacctatgtcaggtcgcatg 
                     gggacatatatagagaatccaacctgtcaaagtgctcctgctgagaata 
                     cgtggacaggcccccaggccccgtccgctcccgccgggggccgccgggt 


SPP00000003_1.0   99 FFKQAHEGGPAPNSEVVLPDGFQSQHILDYAQGNRPLVLNFGSCTXPPF 
                     FFKQAHEGGPAPNSEVVLPDGFQ+QHILDYA+GNRPLVLNFGSCTXPPF 
                     FFKQAHEGGPAPNSEVVLPDGFQNQHILDYARGNRPLVLNFGSCTXPPF 
NIVO01034600.1:50258 ttacgcgggcgcatgggccggtcaccacgtgcgacccgcatgatatcct 
                     ttaacaaggcccacatttcagtaaaattaacggagctttatgggcgcct 
                     ccgggtacgggtctggcgccccgcgccccccaaccgggccctcccaagc 


SPP00000003_1.0  148 MARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPYIIPQHRSL 
                     MARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPY IPQHRSL 
                     MARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPYSIPQHRSL 
NIVO01034600.1:50405 agcaagtcccgaatccgggtcaatagggcctggtgaagtctaaccccac 
                     tcgtgctagttcaaagatattttataacaccaggtccaccagtcaaggt 
                     ggcgcccgcgccgtgccccccccccgagctcccgccactccccggcacg 


SPP00000003_1.0  197 EDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMY 
                     EDRVSAARVLQQGAP CALVLDTM NSSSSAYGAYFERLY+IQSGTIMY 
                     EDRVSAARVLQQGAPECALVLDTMTNSSSSAYGAYFERLYIIQSGTIMY 
NIVO01034600.1:50552 ggcgaggcgcccggcgtgcgcgaaaataatgtggttgcctaacagaaat 
                     aagtgccgttaagccagctttactcacggccagcatagtattaggctta 
                     gcgcccgcaggagtgactcgccagcccccgccccccgcccccgtcctgc 


SPP00000003_1.0  246 QGGRGPDGYQVSELRTWLERYDEQLHGARPRRV                 
                     QGGRGPDGYQVSELRTWLERYDEQLHG +PRRV                 
                     QGGRGPDGYQVSELRTWLERYDEQLHGPQPRRV                 
NIVO01034600.1:50699 cggcgcggtcgtgccatcgctggcccgcccccg                 
                     aggggcagaatcatgcgtagaaaatagcacggt                 
                     gccccccccgccggccgggcttgggccggctag                 


//
>NIVO01034600.1:subseq(4197712,100797).pep
MLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKHLLGRRRRGQPEIEVEL
NSDGEEVPPDDPPVCVSDDNRLCTLASLRAVWHGQKLDFFKQAHEGGPAPNSEVVLPDGF
QNQHILDYARGNRPLVLNFGSCTXPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDG
WVTTDSPYSIPQHRSLEDRVSAARVLQQGAPECALVLDTMTNSSSSAYGAYFERLYIIQS
GTIMYQGGRGPDGYQVSELRTWLERYDEQLHGPQPRRV
//
>NIVO01034600.1:subseq(4197712,100797).[49964:50797].sp
ATGCTGCGCTCCCTGCTGCTTCACTCCCTGAGGCTCTGCGCCCAGACGGCCTCGTGCCTC
GTGCTCTTCCCGCGCTTCCTGGGCACGGCCTTCATGCTCTGGCTGCTAGACTTCCTGTGC
ATCCGCAAGCACTTACTGGGCCGTCGACGCCGGGGTCAGCCGGAAATCGAAGTGGAGCTC
AACAGCGACGGCGAAGAGGTGCCCCCCGACGACCCGCCTGTCTGCGTGTCCGATGACAAC
CGCCTGTGCACCTTGGCGTCGCTGAGGGCCGTCTGGCACGGCCAGAAGTTGGATTTCTTC
AAGCAGGCGCATGAAGGCGGGCCGGCGCCTAACTCTGAGGTGGTCCTGCCCGACGGCTTC
CAGAACCAGCACATCCTCGACTACGCCCGAGGAAACCGCCCGCTGGTGCTCAACTTCGGT
AGCTGCACCTGACCACCGTTCATGGCGCGCATGAGCGCCTTCCAGCGCCTGGTCACCAAG
TATCAGCGCGACGTCGACTTCCTCATCATCTACATCGAGGAAGCGCACCCTTCCGACGGC
TGGGTCACCACAGACTCTCCCTACAGCATCCCGCAGCACCGAAGCCTGGAGGACCGGGTC
AGCGCCGCGCGCGTACTGCAGCAAGGGGCTCCGGAATGCGCTCTCGTGCTCGACACAATG
ACCAACTCCAGCAGCTCGGCCTACGGCGCCTACTTCGAGCGCCTCTACATCATCCAGAGT
GGCACCATTATGTACCAGGGCGGCCGCGGCCCCGACGGCTACCAGGTCTCCGAGCTGCGC
ACCTGGCTGGAGCGCTATGATGAGCAGCTGCACGGCCCGCAGCCCCGTCGAGTG
//
NIVO01034600.1:subseq(4197712,100797)	GeneWise	match	49964	50797	649.89	+	.	NIVO01034600.1:subseq(4197712,100797)-genewise-prediction-1
NIVO01034600.1:subseq(4197712,100797)	GeneWise	cds	49964	50797	0.00	+	0	NIVO01034600.1:subseq(4197712,100797)-genewise-prediction-1
//

genewise output
Score 20.09 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000003_1.0  187 PYIIPQHRSLEDRVSAARVLQQGAPGC                       
                     P++I    +L   VSA    + G PGC                       
                     PFVIQMFCNLPGNVSALTGREGGGPGC                       
NIVO01034600.1-28650 ctgacattaccgagagcagaggggcgt                       
                     ctttattgatcgatgctcggagggcgg                       
                     atttagtctttatgttctggggccacc                       


//
>NIVO01034600.1:subseq(4197712,100797).pep
PFVIQMFCNLPGNVSALTGREGGGPGC
//
>NIVO01034600.1:subseq(4197712,100797).[28650:28568].sp
CCATTTGTTATTCAAATGTTTTGCAATCTTCCTGGAAATGTGAGTGCTCTCACTGGGAGG
GAGGGGGGCGGCCCAGGCTGC
//
NIVO01034600.1:subseq(4197712,100797)	GeneWise	match	28650	28570	20.09	-	.	NIVO01034600.1:subseq(4197712,100797)-genewise-prediction-1
NIVO01034600.1:subseq(4197712,100797)	GeneWise	cds	28650	28570	0.00	-	0	NIVO01034600.1:subseq(4197712,100797)-genewise-prediction-1
//