------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 44779 - 44707 Found by: Infernal (score=24.5) Covels (score=34.18) Stem2 length = 10 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -19.67 Type = 1 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({((((((---....{[[(((((((((((..................)))))))))))]]}..--..-.))))))})) target ACUAGUGUG---CAAAUGAUAACUGCUAACGAAAGAGUCCUUGACUCAGUUAGUGGUUGGAUGU--AG-UCACACUUGU **** ^^^ ****