genewise output
Score 20.09 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000002_1.0   60 LRCVWKSFLL                                        
                     L+CVW SF L                                        
                     LKCVWNSFKL                                        
NIVO01066248.1:12234 catgtattac                                        
                     tagtgactat                                        
                     cattgttcgg                                        


//
>NIVO01066248.1:subseq(6673153,109011).pep
LKCVWNSFKL
//
>NIVO01066248.1:subseq(6673153,109011).[12234:12263].sp
CTCAAATGTGTTTGGAATTCTTTCAAGCTG
//
NIVO01066248.1:subseq(6673153,109011)	GeneWise	match	12234	12263	20.09	+	.	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
NIVO01066248.1:subseq(6673153,109011)	GeneWise	cds	12234	12263	0.00	+	0	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
//

genewise output
Score 565.49 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000002_1.0    1 MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
NIVO01066248.1-59011 agacaggtcaaccaccgtttatctcgctgtgaccacggcccactatacg 
                     tgttgtatttctattctttcagtttctaacttttaatttttggcaccgg 
                     gccccacggcaggtgattccccccggctcgctccgcgggggcccgctcg 


SPP00000002_1.0   50 EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
                     +WRRMLTSEG+RC+WKSFLLDAYKQ                       V 
                     QWRRMLTSEGMRCIWKSFLLDAYKQ                       V 
NIVO01066248.1-58864 ctacacatggactataatccggtacGTGAGCG  Intron 1   CAGg 
                     agggttccagtggtgagtttacaaa<0-----[58789:50573]-0>t 
                     gggcggcaaagcccgacccgcccag                       g 


SPP00000002_1.0   76 KLGEDAPNSSVVHVSSTEGGDNSGNGTQEKIAEGATCHLLDFASPERPL 
                     KLGEDAPNS VV VSS EGGD SGNG QEK A+G  CHLLDFASPERPL 
                     KLGEDAPNSRVVPVSSPEGGDTSGNGAQEKTADGPECHLLDFASPERPL 
NIVO01066248.1-50569 acggggcatcggcgtacggggaagaggcgaagggcgtcccgtgacgccc 
                     atgaaccacgttctcgcaggacggagcaaaccagcagattatcgcagct 
                     agtatcctccggtcctgaatcctattcggaagtatacctgctcctgcgg 


SPP00000002_1.0  125 VVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGWAIP 
                     VVNFGSATXPPFT+QLPAF KLVEEFSSVADFLLVYIDEAHPSDGWA+P 
                     VVNFGSATXPPFTNQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVP 
NIVO01066248.1-50422 ggatgtgatcctaacccgtaacgggtttgggtctgtagggcctggtggc 
                     ttatgcccgcctcaatcctgattaatcctcattttataacaccaggctc 
                     gccccgctattctcggacccaggagcacgtccggccttgtttattgggt 


SPP00000002_1.0  174 GDSSLSFEVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANIA 
                     GDSSL FEVKKH+NQEDRCAAAQQLLERFSLPPQCRVVADRMDNNAN+A 
                     GDSSLFFEVKKHRNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANVA 
NIVO01066248.1-50275 ggtttttggaaccacggctgggccccgctttccctcggggcagaagagg 
                     gacctttataaagaaaaggcccaattagtctccaggttcagtaaacatc 
                     gtttgtcggggcgcgacacaacggcggtccggcgcatgtccgcttccct 


SPP00000002_1.0  223 YGVAFERVCIVQRQKIAYLGGKGPFSYNLQEVRHWLEKNFSKR       
                     YGVAFERVCIVQRQKIAYLGGKGPF YNLQEVR WLEKNFSKR       
                     YGVAFERVCIVQRQKIAYLGGKGPFFYNLQEVRRWLEKNFSKR       
NIVO01066248.1-50128 tgggtgcgtagcacaagtcggagctttaccggcctcgaataaa       
                     agtctagtgttagaatcatggagcttaataatgggtaaatgag       
                     tgactacgctggagatttgaagtcctccgaacgtggggtccga       


//
>NIVO01066248.1:subseq(6673153,109011).pep
MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRGQWRRMLTSEGM
RCIWKSFLLDAYKQVKLGEDAPNSRVVPVSSPEGGDTSGNGAQEKTADGPECHLLDFASP
ERPLVVNFGSATXPPFTNQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVPGDSSLFF
EVKKHRNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANVAYGVAFERVCIVQRQKIAY
LGGKGPFFYNLQEVRRWLEKNFSKR
//
>NIVO01066248.1:subseq(6673153,109011).[59011:49998].sp
ATGGGCATCCTCAGCGTAGACTTGCTGATCACACTGCAGATTCTGCCAGTTTTTTTCTCC
AACTGCCTCTTCCTGGCGCTCTATGACTCGGTCATTCTCCTCAAGCACGTGGTGCTGCTG
CTGAGCCGCTCCAAGTCCACTCGCGGGCAGTGGAGGCGCATGCTGACCTCAGAAGGAATG
CGCTGCATCTGGAAAAGCTTCCTCCTGGACGCCTACAAACAGGTGAAACTGGGTGAAGAT
GCCCCCAATTCCCGCGTGGTGCCTGTCTCCAGTCCGGAAGGAGGTGACACCAGTGGAAAT
GGTGCCCAGGAGAAAACAGCGGATGGACCTGAATGCCACCTTCTGGACTTTGCCAGCCCT
GAGCGCCCGCTGGTGGTCAACTTCGGCTCGGCCACTTGACCTCCTTTCACTAACCAGCTG
CCAGCCTTCAGCAAACTGGTGGAAGAGTTCTCATCCGTGGCTGACTTCCTGTTGGTCTAC
ATTGATGAGGCTCATCCTTCAGATGGTTGGGCGGTGCCTGGGGATTCTTCTTTGTTTTTC
GAGGTGAAGAAGCACCGGAACCAGGAAGACCGATGCGCAGCAGCCCAGCAGCTCCTGGAG
CGTTTCTCCTTGCCGCCCCAGTGCCGAGTTGTGGCTGACCGCATGGACAATAATGCCAAC
GTCGCTTATGGGGTAGCCTTTGAACGCGTGTGCATTGTGCAGAGACAGAAAATTGCTTAT
CTGGGAGGAAAGGGTCCCTTCTTTTACAACCTGCAAGAAGTCCGGCGTTGGCTGGAGAAG
AATTTCAGCAAGAGA
//
NIVO01066248.1:subseq(6673153,109011)	GeneWise	match	59011	50000	565.49	-	.	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
NIVO01066248.1:subseq(6673153,109011)	GeneWise	cds	59011	58790	0.00	-	0	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
NIVO01066248.1:subseq(6673153,109011)	GeneWise	intron	58789	50573	0.00	-	.	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
NIVO01066248.1:subseq(6673153,109011)	GeneWise	cds	50572	50000	0.00	-	0	NIVO01066248.1:subseq(6673153,109011)-genewise-prediction-1
//