------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 39459 - 39377 Found by: Infernal (score=31.13) Covels (score=32.56) Stem2 length = 10 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -11.28 ..(((((((.......(((((((((((((((................))))))))))))))).............))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu----u-uuucaugaccggc ..((((({(.......{[[{((((((((((..................))))))))))}]]}.........-...)}))))).. target CACUAACGUGCUUUUAUGAUGUUGUAGUUCGGAACCUUAUUGUGAGGAGAGCUAUGACUGAUGGCUGCCAU-GCAAGGUUGGAG **** ^^ ****