_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

Blastx evalue: 4e-19
Query name: gi|844287341|gb|AKN04700.1| thioredoxin reductase 2, partial [Meleagris gallopavo]
Query range: 3-450  (total 450)

Target: /data/www-rg/seblastian_results/210240355/tempfiles/temptarget.fasta
Chromosome: NOIK01000141.1:subseq_1148255,100185_ Strand: -
Positions:
-Exon 1  60519        60664
-Exon 2  60131        60205
-Exon 3  59239        59317
-Exon 4  58136        58198
-Exon 5  56938        57008
-Exon 6  52700        52811
-Exon 7  50008        50182
-Exon 8  43255        43391
-Exon 9  37849        37944
-Exon 10 37549        37641
-Exon 11 36646        36717
-Exon 12 34709        34806
-Exon 13 32318        32444

Redox box: no

Query   GTKWGLGGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMAHPVHHSW <---Intron---> SVMAQAVQNYVKSLNWGHRVQLQDK <---Intro
       |||||||||||||||||||||||||||| |||||| |||//||||||/| <   313bp    > | ||||||||||||||||||||||| <   813bp
Target  GTKWGLGGTCVNVGCIPKKLMHQAALLGSALKDAQCYGWNIAHPVHHNW                SEMAQAVQNYVKSLNWGHRVQLQDK          
       gaatgcggatgaggtacaacaccggctgagcaggcttgtaagccgccat                tgagcggcatgattatgcagcccga          
       gcaggtggcgtatggtcaattaaccttggctaacagaggatcactaaag                catcactaaatactaggagtataaa          
       acagattatcgtttcttagcgtaactactctatcgctcgtaccttttc                gaggtattgtcggtgcgacaggaac           
                                                                                                           

Query   n---> KVKYFNMKGSFLDSHTVCGLAKGGKK <---Intron---> TTLTAEKIVIATGGRPKYPTH <---Intron---> ITGALEYGITSDDLF
           > ||||||/|||| | ||/ || ||||/ <   1040bp   > | ||||||||||||||||||| <   1127bp   > / |||||||||||||
Target        KVKYFNVKGSFSDPHTIRGLTKGGKE                TILTAEKIVIATGGRPKYPTH                VAGALEYGITSDDLF
             agattagagattgccaacgtaaggag                aacaggaagagaggacatcac                ggggcgtgaaaggct
             ataatataggtcacactggtcaggaa                cttccaatttccgggcaacca                tcgctaagtcgaatt
            gggatctcagttatatacttaaaatag                ttttaaatctttaaaaattac                tatgggtacattcgc
                                                                                                           

Query   WLKDSPGKT <---Intron---> LVVGASYVSLECAGFLTGVGLDTAVMMRSIPLRGFDQ <---Intron---> QMASLVTEHMESYGTKFLKKCV
       |||/||||| <   4126bp   > |/  /  /||||||||||/|||| ||||||||||||| <   2517bp   > ||||||||/||||||||||||/
Target  WLKESPGKT                LIDTSPDISLECAGFLTGIGLDTMVMMRSIPLRGFDQ                QMASLVTEYMESYGTKFLKKCI
       ttagtcgaa                tagatcgatcgtggtcagagcgaagaaaaacccgtgc                cagttgagtagttgaattaata
       gtaaccgac                ttacccatctagcgttcgtgtacttttggtctggtaa                atccttcaatacagcattaagt
       gaaattaa                tatttaattatattttatctaactgcggatcattgttg                agataaagcgattcaatagatc
                                                                                                           

Query   PMKVEKLESGRLQVTWKNTDLGTEEMDSFDTVMWAVG <---Intron---> RVPDSETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAIGDITE <
       | ||||||| || ||||||| |||| ||||||||||| <   6616bp   > | ||// |||| |||||||||||||||||||||||||||/||||| <
Target  PTKVEKLESNRLHVTWKNTDSGTEEADSFDTVMWAVG                RAPDTKALNLEAVGVKTNSETGKIIVDASEATSVPHIYAVGDITE  
       caaggatgaaatcgataaagtgaggggttgagatggg                cgcgaagcatgggggaaatgagaaagggaggatgccatggggaag  
       ccataatagagtatcgaacacgcaacactacttgct                ggccacactatactgtacacacgatttacgaccctcatactgatca  
       aaataagaccaacccgattcgcaaagtctcagggaa                tgttccagttggatagatttatagctgtctatttttctcatacaag  
                                                                                                           

Query   ---Intron---> GRPELTPTAIAAGKLLARRLFGHSSELMDYDN <---Intron---> VPTTVFTPLEYGCVGLSEEKAVQCYGSDNVE <---In
          5310bp   > |||||||||||||||||/|||| ||||||||| <   207bp    > |||||||||||||||||||||||||||||/| <   83
Target                GRPELTPTAIAAGKLLAQRLFGQSSELMDYDN                VPTTVFTPLEYGCVGLSEEKAVQCYGSDNIE       
                     gccgtacagagggaccgccctgcttgtagtga                gcaagtactgtgtggctggaggcttgtgaag       
                     ggcatcccctccgattcagttgaccattaaaa                tcccttcctaaggtgtcaaactagagcaata       
                     cttagacaaataaaggtgtttcgtaaggctct                attatctcaattttggaaagcggttaatttg       
                                                                                                           

Query   tron---> VFHAYYKPLEFTAAERDAAQCYMK <---Intron---> MVCLREREQRILGLHFIGPNAGEVIQGFALGIK <---Intron---> CG
       1bp    > |/||/||||||| ||||| ||||| <   1839bp   > ||||||||||||||||||||||||||||||||| <   2264bp   > ||
Target           VYHAFYKPLEFTVAERDATQCYMK                MVCLREREQRILGLHFIGPNAGEVIQGFALGIK                CG
                gtcgttactgtagggaggacttaa                agttcgagccacgcctagcaggggacgtgcgaa                tg
                taactaactatctcagaccagata                ttgtgagaagttgtattgcacgattagtctgta                gg
                gctattatagtagtaatatactga                ggcaagggaactcttctaatacattaatttac                att
                                                                                                           

Query   ATYPQLMKTIGIHPTCAEEITKLHITKRSGLDATVTGCUG
       |||||||||/||||||||||||||||||||||||||||||
Target  ATYPQLMKTVGIHPTCAEEITKLHITKRSGLDATVTGCUG
       gatcccaaaggaccatgggaaatcaaactgtggagagttg
       ccacattactgtaccgcaatcatatcagcgtacctcgggg
       tcttaaggatctctcttaatcggttaatttgtaacagcat
                                             * 
Sequence until next stop: 
TAA
* 

Distance CDS-SECIS: 2603 ; UGA-SECIS: 2606